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14_0903_12_30cm_scaffold_3925

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_12_30cm_scaffold_3925_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..1046)
DNA (1044bp) protein (348aa)
Drug resistance transporter, EmrB/QacA subfamily id=1740938 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
MFS transporter
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
14_0903_12_30cm_scaffold_3925_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1107..1739
DNA (633bp) protein (211aa)
MutT/nudix family protein id=4388224 bin=GWA2_Methylomirabilis_73_35 species=Frankia alni genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MutT/nudix family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0903_12_30cm_scaffold_3925_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1760..2752
DNA (993bp) protein (331aa)
Short-chain dehydrogenase/reductase SDR id=4887998 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Rokubacteria_70_23_curated
14_0903_12_30cm_scaffold_3925_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2749..3225
DNA (477bp) protein (159aa)
Protein tyrosine phosphatase id=4887997 bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
low molecular weight protein-tyrosine-phosphatase
Tax=GWA2_Rokubacteria_70_23_curated
14_0903_12_30cm_scaffold_3925_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3218..4030)
DNA (813bp) protein (271aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XGA5_NAKMY
xylose isomerase
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACV80107.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
14_0903_12_30cm_scaffold_3925_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4170..6329
DNA (2160bp) protein (720aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035EFF67
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
14_0903_12_30cm_scaffold_3925_7
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6658..8067)
DNA (1410bp) protein (470aa)
Cytochrome c Hsc n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7T7F7_9DELT
Cytochrome c Hsc {ECO:0000313|EMBL:EPR33047.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
cytochrome c Hsc
14_0903_12_30cm_scaffold_3925_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8361..8657
DNA (297bp) protein (99aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding id=1863214 bin=GWA2_Methylomirabilis_73_35 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_0903_12_30cm_scaffold_3925_9
unknown

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9123..9329
DNA (207bp) protein (69aa)

This feature has no annotations

14_0903_12_30cm_scaffold_3925_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(9335..10069)
DNA (735bp) protein (245aa)
ECF subfamily RNA polymerase sigma factor id=4751264 bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sigW5; ECF subfamily RNA polymerase sigma factor
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Displaying 10 items

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