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14_0903_12_30cm_scaffold_935

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_12_30cm_scaffold_935_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1..549
DNA (549bp) protein (183aa)
malate dehydrogenase (EC:1.1.1.37)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036AE334
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0903_12_30cm_scaffold_935_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

549..773
DNA (225bp) protein (75aa)
Putative uncharacterized protein id=4998222 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0903_12_30cm_scaffold_935_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

770..2101
DNA (1332bp) protein (444aa)
Amino acid/polyamine/organocation transporter, APC superfamily id=4998223 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid permease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0903_12_30cm_scaffold_935_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2098..3072
DNA (975bp) protein (325aa)
magnesium and cobalt transport protein CorA; K03284 magnesium transporter id=14626346 bin=bin7_NC10_sister species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10 rbh
magnesium and cobalt transport protein CorA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_0903_12_30cm_scaffold_935_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3229..3582)
DNA (354bp) protein (118aa)
hypothetical protein id=4998224 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0903_12_30cm_scaffold_935_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3579..4451)
DNA (873bp) protein (291aa)
Putative uncharacterized protein id=4998225 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0903_12_30cm_scaffold_935_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4584..5213
DNA (630bp) protein (210aa)
Organic solvent tolerance ABC transporter, periplasmic substrate-binding protein id=4998226 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
organic solvent tolerance ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0903_12_30cm_scaffold_935_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

5245..6765
DNA (1521bp) protein (507aa)
sodium solute transporter superfamily protein id=14627648 bin=bin7_NC10_sister species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
sodium solute transporter superfamily protein
Tax=CSP1_6_Rokubacteria
14_0903_12_30cm_scaffold_935_9
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6746..7879)
DNA (1134bp) protein (378aa)
fatty-acid--CoA ligase (EC:6.2.1.-)
Putative fatty-acid--CoA ligase {ECO:0000313|EMBL:CAM06112.1}; EC=6.2.1.- {ECO:0000313|EMBL:CAM06112.1};; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI000375F3C6
14_0903_12_30cm_scaffold_935_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8170..9648)
DNA (1479bp) protein (493aa)
Glycosyl hydrolase domain protein id=4788498 bin=GWC2_Methylomirabilis_70_16 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
beta-N-acetylhexosaminidase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0903_12_30cm_scaffold_935_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9914..10450
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003764836
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0903_12_30cm_scaffold_935_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10572..10925
DNA (354bp) protein (118aa)
id=3877521 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0903_12_30cm_scaffold_935_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10930..12117)
DNA (1188bp) protein (396aa)
Uncharacterised conserved protein UCP016719 id=4485812 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0903_12_30cm_scaffold_935_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12149..13132
DNA (984bp) protein (328aa)
N-acetylmuramic acid 6-phosphate etherase id=3431007 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
murQ; N-acetylmuramic acid 6-phosphate etherase
Tax=GWA2_Rokubacteria_73_35_curated
14_0903_12_30cm_scaffold_935_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13041..13679)
DNA (639bp) protein (213aa)
MOSC domain containing protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QK31_CATAD
MOSC domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0903_12_30cm_scaffold_935_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13722..15455)
DNA (1734bp) protein (578aa)
dihydroxyacid dehydratase (EC:4.2.1.9) rbh
Dihydroxy-acid dehydratase id=3431010 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium CSLF43 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0903_12_30cm_scaffold_935_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15502..16299
DNA (798bp) protein (266aa)
Uncharacterized protein id=3068161 bin=GWC2_Methylomirabilis_70_16 species=Pseudomonas sp. GM50 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dehydrogenase
Tax=GWC2_Rokubacteria_70_16_curated
14_0903_12_30cm_scaffold_935_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16392..17570
DNA (1179bp) protein (393aa)
Acyl-CoA dehydrogenase domain protein id=4485927 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
acyl-CoA dehydrogenase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0903_12_30cm_scaffold_935_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17573..18355
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase/isomerase family protein id=3068152 bin=GWC2_Methylomirabilis_70_16 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
enoyl-CoA hydratase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0903_12_30cm_scaffold_935_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18504..19010
DNA (507bp) protein (169aa)
id=14625322 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0903_12_30cm_scaffold_935_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(19011..19589)
DNA (579bp) protein (193aa)
ThiJ/PfpI domain-containing protein id=14625351 bin=bin7_NC10_sister species=Bacillus methanolicus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ThiJ/PfpI domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0903_12_30cm_scaffold_935_22
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(19586..20281)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCE3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH89960.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
14_0903_12_30cm_scaffold_935_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20283..20807)
DNA (525bp) protein (175aa)
siderophore-binding protein id=4485938 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
carbonic anhydrase
Tax=GWA2_Rokubacteria_70_23_curated
14_0903_12_30cm_scaffold_935_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20878..21900
DNA (1023bp) protein (341aa)
Chalcone and stilbene synthase domain protein id=14627397 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Chalcone and stilbene synthase domain protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 24 items

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