ggKbase home page

14_0903_12_40cm_200_scaffold_2520

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_12_40cm_200_scaffold_2520_1
unknown

Not on your lists

3..245
DNA (243bp) protein (81aa)

This feature has no annotations

14_0903_12_40cm_200_scaffold_2520_2
unknown

Not on your lists

400..987
DNA (588bp) protein (196aa)

This feature has no annotations

14_0903_12_40cm_200_scaffold_2520_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

998..1807
DNA (810bp) protein (270aa)
Ammonia monooxygenase subunit A (Fragment) n=1 Tax=uncultured ammonia-oxidizing beta proteobacterium RepID=A3F8K4_9PROT
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
14_0903_12_40cm_200_scaffold_2520_4
unknown

Not on your lists

1813..1995
DNA (183bp) protein (61aa)

This feature has no annotations

14_0903_12_40cm_200_scaffold_2520_5
unknown

Not on your lists

1964..2824
DNA (861bp) protein (287aa)

This feature has no annotations

14_0903_12_40cm_200_scaffold_2520_6
unknown

Not on your lists

2821..3120
DNA (300bp) protein (100aa)

This feature has no annotations

14_0903_12_40cm_200_scaffold_2520_7
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

3143..3910
DNA (768bp) protein (256aa)
Isoprenylcysteine carboxyl methyltransferase id=2234639 bin=GWB2_Nitrospirae_rel_47_37 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Isoprenylcysteine carboxyl methyltransferase
Tax=RBG_16_Archaea_50_20_curated
14_0903_12_40cm_200_scaffold_2520_8
Aeropyrum pernix, Aeropyrum, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(3937..4959)
DNA (1023bp) protein (341aa)
adh; NAD-dependent alcohol dehydrogenase (EC:1.1.1.1)
NAD-dependent alcohol dehydrogenase {ECO:0000313|EMBL:BAA81251.2}; EC=1.1.1.1 {ECO:0000313|EMBL:BAA81251.2};; TaxID=272557 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Aeropyrum.;" source="Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC; 100138 / K1).;"
NAD-dependent alcohol dehydrogenase n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Q9Y9P9_AERPE
14_0903_12_40cm_200_scaffold_2520_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5027..5308
DNA (282bp) protein (94aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0903_12_40cm_200_scaffold_2520_10
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

5418..6044
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003451AF9
hypothetical protein
Tax=RBG_16_Chloroflexi_54_11_curated
14_0903_12_40cm_200_scaffold_2520_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(6113..7069)
DNA (957bp) protein (319aa)
Ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] id=24595020 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ornithine cyclodeaminase (EC:4.3.1.12)
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
14_0903_12_40cm_200_scaffold_2520_12

Not on your lists

comp(7190..7762)
DNA (573bp) protein (191aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:EQD74621.1}; EC=1.4.-.- {ECO:0000313|EMBL:EQD74621.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=mine drainage metagenome RepID=T1BP86_9ZZZZ
hypothetical protein
14_0903_12_40cm_200_scaffold_2520_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(7767..9452)
DNA (1686bp) protein (562aa)
N-acyl-D-amino-acid deacylase (EC:3.5.1.81)
N-acyl-D-amino-acid deacylase id=4884113 bin=GWC2_Methylomirabilis_70_24 species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0903_12_40cm_200_scaffold_2520_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9625..10062
DNA (438bp) protein (146aa)
Glutamate-1-semialdehyde aminotransferase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L3Q8_KORCO
glutamate-1-semialdehyde aminotransferase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 14 items

View Taxonomy