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14_0903_13_30cm_scaffold_211365

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_13_30cm_scaffold_211365_1
unknown

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comp(3..182)
DNA (180bp) protein (60aa)

This feature has no annotations

14_0903_13_30cm_scaffold_211365_2

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comp(193..1401)
DNA (1209bp) protein (403aa)
galactonate dehydratase (EC:4.2.1.6)
Galactonate dehydratase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJK6_RHOMR
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48729.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
14_0903_13_30cm_scaffold_211365_3
R_NC10_66_22, NC10, Bacteria

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comp(1398..2123)
DNA (726bp) protein (242aa)
hypothetical protein, partial n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI0003706BCA
iolB; Myo-inositol catabolism IolB domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
14_0903_13_30cm_scaffold_211365_4
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(2126..3079)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000364A9F1
hexuronate transporter
Tax=RBG_13_Acidobacteria_68_16_curated
14_0903_13_30cm_scaffold_211365_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3350..4126)
DNA (777bp) protein (259aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIJ1_KORVE
Uncharacterized protein {ECO:0000313|EMBL:CDM66675.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
short-chain dehydrogenase/reductase SDR
14_0903_13_30cm_scaffold_211365_6

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comp(4127..4330)
DNA (204bp) protein (68aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48723.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
GntR family transcriptional regulator id=12556065 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
GntR family transcriptional regulator
14_0903_13_30cm_scaffold_211365_7
S_OP1_64_32, KB1, Bacteria

Not on your lists

4845..5834
DNA (990bp) protein (330aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
UniRef90_UPI00016C46D1 PfkB domain protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46D1 id=1245512 bin=RBG9 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG9 organism_group=Chloroflexi
Tax=S_OP1_64_32
14_0903_13_30cm_scaffold_211365_trna_1
unknown

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5877..5958
DNA (82bp)
transferRNA Leu
14_0903_13_30cm_scaffold_211365_8
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

Not on your lists

6021..6542
DNA (522bp) protein (174aa)
hypothetical protein id=1249810 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Predicted membrane protein
Tax=RBG_16_Zixibacteria_48_11_curated
14_0903_13_30cm_scaffold_211365_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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6583..7626
DNA (1044bp) protein (348aa)
LacI family transcriptional regulator n=2 Tax=Rhodanobacter RepID=I4WNC0_9GAMM id=5223544 bin=16ft_combo_ws3_JS1 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
LacI family transcriptional regulator
Tax=RBG_16_RIF_WS3X_71_46_curated
14_0903_13_30cm_scaffold_211365_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7623..10589
DNA (2967bp) protein (989aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037BBCDE
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AHG89209.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0903_13_30cm_scaffold_211365_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10651..12045
DNA (1395bp) protein (465aa)
Protein of unknown function DUF2329
Uncharacterized protein {ECO:0000313|EMBL:AHG89210.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=24457720 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
14_0903_13_30cm_scaffold_211365_12
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12222..12566
DNA (345bp) protein (115aa)
ABC transporter sugar binding protein n=23 Tax=Xanthomonas RepID=Q8PK66_XANAC id=5223542 bin=16ft_combo_ws3_JS1 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Sugar ABC transporter, periplasmic sugar-binding protein USSDB1B {ECO:0000313|EMBL:KFE71979.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
ABC transporter substrate-binding protein
14_0903_13_30cm_scaffold_211365_13
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12512..12886
DNA (375bp) protein (125aa)
ABC transporter sugar binding protein n=23 Tax=Xanthomonas RepID=Q8PK66_XANAC id=5223542 bin=16ft_combo_ws3_JS1 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Putative sugar ABC transporter, sugar-binding protein {ECO:0000313|EMBL:CDH47426.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
sugar ABC transporter substrate-binding protein
Displaying 14 items

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