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14_0903_13_30cm_scaffold_1883546

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_13_30cm_scaffold_1883546_1
Rhodobacter sp. AKP1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..476)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. AKP1 RepID=L1KG15_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EKX59504.1}; TaxID=1247725 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. AKP1.;"
signal transduction histidine kinase
14_0903_13_30cm_scaffold_1883546_2
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

986..1789
DNA (804bp) protein (268aa)
Sensory transduction histidine kinase n=1 Tax=Beggiatoa sp. PS RepID=A7BTG5_9GAMM
Sensory transduction histidine kinase {ECO:0000313|EMBL:EDN70170.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
integral membrane sensor signal transduction histidine kinase
14_0903_13_30cm_scaffold_1883546_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1801..2622
DNA (822bp) protein (274aa)
Putative lipoprotein id=3461021 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lipoprotein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0903_13_30cm_scaffold_1883546_4
unknown

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comp(2753..2950)
DNA (198bp) protein (66aa)

This feature has no annotations

14_0903_13_30cm_scaffold_1883546_5
Pseudomonas sp. GM84, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3400..4068)
DNA (669bp) protein (223aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Pseudomonas sp. GM84 RepID=J2XHX8_9PSED
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EJN30797.1}; TaxID=1144340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM84.;"
3-oxoadipate enol-lactonase
14_0903_13_30cm_scaffold_1883546_6
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4065..5126)
DNA (1062bp) protein (354aa)
Alkanal monooxygenase alpha chain {ECO:0000313|EMBL:ESR25056.1}; EC=1.14.14.3 {ECO:0000313|EMBL:ESR25056.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
Alkanal monooxygenase alpha chain n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RFY3_9RHIZ
monooxygenase
14_0903_13_30cm_scaffold_1883546_7
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(5123..5968)
DNA (846bp) protein (282aa)
283aa long hypothetical oligopeptide transport permease protein APPC n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58539_PYRHO
oligopeptide transport permease APPC
283aa long hypothetical oligopeptide transport permease protein APPC {ECO:0000313|EMBL:BAA29902.1}; TaxID=70601 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /; NBRC 100139 / OT-3).;"
14_0903_13_30cm_scaffold_1883546_8
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5961..6935)
DNA (975bp) protein (325aa)
Dipeptide ABC transporter, permease component n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZEL9_AZOL4
dppB3; Dipeptide ABC transporter, permease component
Dipeptide ABC transporter, permease component {ECO:0000313|EMBL:CBS90224.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
14_0903_13_30cm_scaffold_1883546_9
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6932..8530)
DNA (1599bp) protein (533aa)
peptide-binding protein n=1 Tax=Geovibrio thiophilus RepID=UPI0003B4E6EB
putative extracellular solute-binding protein, family 5
Tax=BJP_IG2102_Desulfovibrionales_64_25
14_0903_13_30cm_scaffold_1883546_10

Not on your lists

comp(8620..9750)
DNA (1131bp) protein (377aa)
Peptidase M24 (PepQ) {ECO:0000313|EMBL:AIF02957.1}; EC=3.4.13.9 {ECO:0000313|EMBL:AIF02957.1};; TaxID=1456029 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_15_F02.;"
X-Pro dipeptidase (EC:3.4.13.9)
Peptidase M24 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TR70_9PROT
14_0903_13_30cm_scaffold_1883546_11
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(9750..10553)
DNA (804bp) protein (268aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA56_SPHTD
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACZ40699.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
14_0903_13_30cm_scaffold_1883546_12
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(10550..11434)
DNA (885bp) protein (295aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZF7_THERP
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACM05492.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
14_0903_13_30cm_scaffold_1883546_13
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(11431..11976)
DNA (546bp) protein (182aa)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000256|HAMAP-Rule:MF_01706}; EC=3.6.3.30 {ECO:0000256|HAMAP-Rule:MF_01706};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
ABC transporter ATP-binding protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZG1_THERP
ABC transporter ATP-binding protein
14_0903_13_30cm_scaffold_1883546_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(11921..12445)
DNA (525bp) protein (175aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Spermidine/putrescine ABC transporter ATPase subunit n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C890_SPHTD
spermidine/putrescine ABC transporter ATPase
14_0903_13_30cm_scaffold_1883546_15
Brenneria sp. EniD312, Brenneria, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12424..13536)
DNA (1113bp) protein (371aa)
Extracellular solute-binding protein family 1 n=1 Tax=Brenneria sp. EniD312 RepID=G7LLI6_9ENTR
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EHD22372.1}; TaxID=598467 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Brenneria.;" source="Brenneria sp. EniD312.;"
extracellular solute-binding protein family 1
14_0903_13_30cm_scaffold_1883546_16
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13607..14458)
DNA (852bp) protein (284aa)
Polysaccharide deacetylase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA38_SPHTD
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:KGM42834.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
polysaccharide deacetylase
14_0903_13_30cm_scaffold_1883546_17
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14521..15837
DNA (1317bp) protein (439aa)
oxidoreductase (EC:1.-.-.-)
Fad dependent oxidoreductase n=1 Tax=Ralstonia sp. PBA RepID=I9KTC4_9RALS
Fad dependent oxidoreductase {ECO:0000313|EMBL:EIZ03495.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
14_0903_13_30cm_scaffold_1883546_18
Erwinia typographi, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15843..16976)
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000382D8F0
Creatininase {ECO:0000313|EMBL:KGT95198.1}; TaxID=371042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia typographi.;"
Xaa-Pro aminopeptidase
14_0903_13_30cm_scaffold_1883546_19
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16973..18970)
DNA (1998bp) protein (666aa)
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NV46_HALBP
peptide ABC transporter ATPase
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component {ECO:0000313|EMBL:ADQ69035.1}; Peptide ABC transporter ATPase {ECO:0000313|EMBL:ELY29463.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM; 10706 / PR3).;"
14_0903_13_30cm_scaffold_1883546_20
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18970..19770)
DNA (801bp) protein (267aa)
ABC-type transport system permease protein (Probable substrate dipeptides/oligopeptides) n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4H0F4_HALVD
dppC16; ABC-type transport system permease protein (probable substrate dipeptides/oligopeptides)
ABC-type transport system permease protein (Probable substrate dipeptides/oligopeptides) {ECO:0000313|EMBL:ADE05269.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC; 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii).;"
14_0903_13_30cm_scaffold_1883546_21
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19770..20717)
DNA (948bp) protein (316aa)
Peptide ABC transporter permease n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AP48_9EURY
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EUB99519.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
peptide ABC transporter permease
14_0903_13_30cm_scaffold_1883546_22
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20719..22287)
DNA (1569bp) protein (523aa)
ABC-type dipeptide transport system, extracellular solute-binding protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XZP8_PARAH
ABC-type dipeptide transport system, extracellular solute-binding protein
ABC-type dipeptide transport system, extracellular solute-binding protein {ECO:0000313|EMBL:AGT10767.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
14_0903_13_30cm_scaffold_1883546_23
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22284..23477)
DNA (1194bp) protein (398aa)
Peptidase M20 n=2 Tax=Dickeya dadantii (strain Ech703) RepID=C6CBH1_DICDC
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:ACS84756.1}; TaxID=579405 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya dadantii (strain Ech703).;"
14_0903_13_30cm_scaffold_1883546_24
unknown

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comp(23488..23598)
DNA (111bp) protein (37aa)

This feature has no annotations

14_0903_13_30cm_scaffold_1883546_25
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23630..24637)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003729750 rbh
Uncharacterized protein {ECO:0000313|EMBL:EDP63243.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
amidinotransferase
14_0903_13_30cm_scaffold_1883546_26
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(24648..25757)
DNA (1110bp) protein (370aa)
Putative sgc region protein sgcX n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0J3_THERP
Uncharacterized protein {ECO:0000313|EMBL:KIJ77019.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
putative sgc region protein sgcX
14_0903_13_30cm_scaffold_1883546_27
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

comp(25754..26977)
DNA (1224bp) protein (408aa)
Acetylornithine deacetylase n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0F900_9NOCA
acetylornithine deacetylase
Tax=RBG_13_Bathyarchaeota_52_12_curated
14_0903_13_30cm_scaffold_1883546_28
bacterium YEK0313, Bacteria

Not on your lists

comp(26965..28002)
DNA (1038bp) protein (346aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HL63_ACIS0
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:CEJ10413.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein
14_0903_13_30cm_scaffold_1883546_29
bacterium YEK0313, Bacteria

Not on your lists

comp(27999..28934)
DNA (936bp) protein (312aa)
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:CEJ10412.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein id=14630908 bin=bin9_gal15 species=Halomonas sp. KM-1 genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
Oligopeptide/dipeptide ABC transporter, ATPase subunit
Displaying 29 items

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