ggKbase home page

14_0903_13_30cm_scaffold_523840

Search features with annotation key words

Displaying items 1-30 of 65 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_13_30cm_scaffold_523840_1
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3..1016)
DNA (1014bp) protein (338aa)
Peptidase M48, Ste24p n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021Y2_SOLUE
peptidase M48, Ste24p
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0903_13_30cm_scaffold_523840_2
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

1289..1513
DNA (225bp) protein (75aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
14_0903_13_30cm_scaffold_523840_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(1532..2305)
DNA (774bp) protein (258aa)
LmbE family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X51_SOLUE
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:ABJ85764.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0903_13_30cm_scaffold_523840_4

Not on your lists

2377..3168
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM57_9BACT
Short chain dehydrogenase {ECO:0000313|EMBL:AIA12124.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
short-chain dehydrogenase
14_0903_13_30cm_scaffold_523840_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

3351..6029
DNA (2679bp) protein (893aa)
2-oxo-acid dehydrogenase E1 subunit, homodimeric type; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] id=14426105 bin=bin1_lowGC species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
aceE; pyruvate dehydrogenase subunit E1
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
14_0903_13_30cm_scaffold_523840_6
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6077..6502)
DNA (426bp) protein (142aa)
Hydrolase, NUDIX family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4D6_ACIC5
NUDIX family hydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
14_0903_13_30cm_scaffold_523840_7
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6499..7146)
DNA (648bp) protein (216aa)
ABC transporter, iron chelate uptake transporter (FeCT) family, periplasmic substrate-binding protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4D7_ACIC5
iron chelate ABC transporter substrate-binding protein
ABC transporter, iron chelate uptake transporter (FeCT) family, periplasmic substrate-binding protein {ECO:0000313|EMBL:ACO32266.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
14_0903_13_30cm_scaffold_523840_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

7403..8422
DNA (1020bp) protein (340aa)
acetamidase n=1 Tax=Salinispora arenicola RepID=UPI00036167FF
acetamidase/formamidase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0903_13_30cm_scaffold_523840_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

8498..8911
DNA (414bp) protein (138aa)
Nitrogen-fixing NifU domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023P2_SOLUE
NifU domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
14_0903_13_30cm_scaffold_523840_10
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(8908..9495)
DNA (588bp) protein (196aa)
4-diphosphocytidyl-2C-methyl-D-erythritolsynthas E id=2013955 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
molybdenum hydroxylase accessory protein, YgfJ family
Tax=RBG_13_Planctomycetes_60_9_curated
14_0903_13_30cm_scaffold_523840_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(9506..10342)
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01U75_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
14_0903_13_30cm_scaffold_523840_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

10462..11211
DNA (750bp) protein (250aa)
Alcohol dehydrogenase, zinc-binding domain protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK52_9BACT
alcohol dehydrogenase
Alcohol dehydrogenase, zinc-binding domain protein {ECO:0000313|EMBL:CBE69674.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
14_0903_13_30cm_scaffold_523840_13
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11516..12439
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031BF935
Lipase/esterase/arylesterase {ECO:0000313|EMBL:GAN76426.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
alpha/beta hydrolase rbh
14_0903_13_30cm_scaffold_523840_14
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12436..13932
DNA (1497bp) protein (499aa)
Flavoprotein involved in K+ transport-like protein n=3 Tax=Acidiphilium RepID=A5FXH1_ACICJ rbh
putative monooxygenase rbh
Putative monooxygenase {ECO:0000313|EMBL:BAJ80150.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
14_0903_13_30cm_scaffold_523840_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

14002..14541
DNA (540bp) protein (180aa)
NADH-quinone oxidoreductase subunit B n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F315_ACIC5
NADH dehydrogenase subunit B
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0903_13_30cm_scaffold_523840_16
Paenibacillus sp. D9, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14600..15463
DNA (864bp) protein (288aa)
Beta-glucanase n=1 Tax=Paenibacillus sp. P22 RepID=T2LPB1_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KKC49690.1}; TaxID=665792 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. D9.;"
glycoside hydrolase family protein
14_0903_13_30cm_scaffold_523840_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15625..16113
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01V72_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_0903_13_30cm_scaffold_523840_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(16117..17322)
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XN5_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85580.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0903_13_30cm_scaffold_523840_19
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(17435..18127)
DNA (693bp) protein (231aa)
MOSC domain-containing protein id=14430723 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
MOSC domain-containing protein
Tax=CSP1_5_NC10
14_0903_13_30cm_scaffold_523840_20
unknown

Not on your lists

comp(18286..18489)
DNA (204bp) protein (68aa)

This feature has no annotations

14_0903_13_30cm_scaffold_523840_21
R_RIF_OD1_10_46_25, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

18854..19525
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003048DE3
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_10_46_25_curated
14_0903_13_30cm_scaffold_523840_22
unknown

Not on your lists

19675..19818
DNA (144bp) protein (48aa)

This feature has no annotations

14_0903_13_30cm_scaffold_523840_23
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19815..20108
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KZY7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH17134.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
protein of unknown function DUF11
14_0903_13_30cm_scaffold_523840_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20265..22871
DNA (2607bp) protein (869aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000369C8F3
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ABF42006.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_0903_13_30cm_scaffold_523840_25
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22852..23985)
DNA (1134bp) protein (378aa)
hypothetical protein n=3 Tax=Gluconacetobacter europaeus RepID=UPI00031AE6D4
transposase
Tax=BJP_IG2069_Syntrophobacterales_47_18
14_0903_13_30cm_scaffold_523840_26
unknown

Not on your lists

24647..24970
DNA (324bp) protein (108aa)

This feature has no annotations

14_0903_13_30cm_scaffold_523840_27
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(25091..25810)
DNA (720bp) protein (240aa)
Abortive infection protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YW3_SOLUE
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:ABJ85152.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0903_13_30cm_scaffold_523840_28
unknown

Not on your lists

26045..26392
DNA (348bp) protein (116aa)

This feature has no annotations

14_0903_13_30cm_scaffold_523840_29
unknown

Not on your lists

comp(26451..26954)
DNA (504bp) protein (168aa)

This feature has no annotations

14_0903_13_30cm_scaffold_523840_30
unknown

Not on your lists

comp(26938..27387)
DNA (450bp) protein (150aa)

This feature has no annotations

Displaying items 1-30 of 65 in total

View Taxonomy