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14_0903_13_30cm_scaffold_1072664

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_13_30cm_scaffold_1072664_1
Caldithrix abyssi, Caldithrix, Bacteria

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337..1974
DNA (1638bp) protein (546aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
Methionine--tRNA ligase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUV7_9BACT
metG; methionyl-tRNA synthetase
14_0903_13_30cm_scaffold_1072664_2
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2091..3293)
DNA (1203bp) protein (401aa)
3,4-dihydroxy-2-butanone-4-phosphate synthase and GTP cyclohydrolase II id=4047456 bin=GWC2_Nitrospirae_57_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
ribA; 3,4-dihydroxy-2-butanone-4-phosphate synthase and GTP cyclohydrolase II
Tax=GWC2_Geobacteraceae_58_44_curated
14_0903_13_30cm_scaffold_1072664_3
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

3536..4237
DNA (702bp) protein (234aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] id=24398919 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
1-acyl-sn-glycerol-3-phosphate acyltransferase
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
14_0903_13_30cm_scaffold_1072664_4
unknown

Not on your lists

comp(4372..5013)
DNA (642bp) protein (214aa)

This feature has no annotations

14_0903_13_30cm_scaffold_1072664_5
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(5018..5308)
DNA (291bp) protein (97aa)
Riboflavin synthase alpha subunit n=1 Tax=Clostridium sp. CAG:768 RepID=R7HVF5_9CLOT
Riboflavin synthase alpha subunit {ECO:0000313|EMBL:CDE43340.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
riboflavin synthase subunit alpha
14_0903_13_30cm_scaffold_1072664_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5756..6535)
DNA (780bp) protein (260aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
pseudouridine synthase family (EC:5.4.99.12)
Pseudouridine synthase n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2Z6_9BACT
14_0903_13_30cm_scaffold_1072664_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6634..7173)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2Z5_9BACT
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
segregation and condensation protein B
14_0903_13_30cm_scaffold_1072664_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(7179..7952)
DNA (774bp) protein (258aa)
scpA; chromosome segregation and condensation protein ScpA; K05896 segregation and condensation protein A id=12556005 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
scpA; segregation and condensation protein A
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0903_13_30cm_scaffold_1072664_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(7942..8934)
DNA (993bp) protein (331aa)
trpS; tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2) id=14429459 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
trpS; tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2)
Tax=CSP1_5_NC10
14_0903_13_30cm_scaffold_1072664_10
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria

Not on your lists

comp(8931..9650)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI0003620933
Zn-dependent protease
Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
14_0903_13_30cm_scaffold_1072664_11
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9851..10657
DNA (807bp) protein (269aa)
Cytochrome c-type biogenesis protein CcsB id=4323972 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
ResC/HemX-like cytochrome c biogenesis membrane protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
14_0903_13_30cm_scaffold_1072664_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

10666..11946
DNA (1281bp) protein (427aa)
Glutamyl-tRNA reductase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=HEM1_PELCD
hemA; glutamyl-tRNA reductase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
14_0903_13_30cm_scaffold_1072664_13
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12307..13029
DNA (723bp) protein (241aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
hydroxymethylbilane synthase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KL85_9FIRM
14_0903_13_30cm_scaffold_1072664_14
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13029..13781
DNA (753bp) protein (251aa)
uroporphyrin-III C-methyltransferase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase id=4349511 bin=GWC2_Nitrospirae_57_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=RBG_16_Deltaproteobacteria_47_11_curated
14_0903_13_30cm_scaffold_1072664_15
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(13766..14566)
DNA (801bp) protein (267aa)
Outer membrane transport energization protein TonB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILW6_KORVE
TonB-like protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
14_0903_13_30cm_scaffold_1072664_16
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(14877..15524)
DNA (648bp) protein (216aa)
Peptidase dimerization domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4A5_SPHTD
peptidase dimerization domain-containing protein
Peptidase dimerization domain protein {ECO:0000313|EMBL:ACZ39072.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
14_0903_13_30cm_scaffold_1072664_17
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(16150..16560)
DNA (411bp) protein (137aa)
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Diaminopimelate epimerase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE47_CHLTF
14_0903_13_30cm_scaffold_1072664_18
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(17164..18000)
DNA (837bp) protein (279aa)
Putative pyruvate, phosphate dikinase regulatory protein n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LUF5_HIPMA
phosphotransferase ydiA
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
14_0903_13_30cm_scaffold_1072664_19
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18056..19384)
DNA (1329bp) protein (443aa)
Phosphomannomutase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LFH9_SYNFM rbh
phosphomannomutase rbh
Tax=RBG_13_Deltaproteobacteria_52_11_curated
14_0903_13_30cm_scaffold_1072664_20
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19387..20445)
DNA (1059bp) protein (353aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
Bifunctional phosphoglucose/phosphomannose isomerase {ECO:0000313|EMBL:AEG16787.1}; EC=5.3.1.8 {ECO:0000313|EMBL:AEG16787.1};; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00037B4710 rbh
14_0903_13_30cm_scaffold_1072664_21
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20458..21030)
DNA (573bp) protein (191aa)
FOG: CheY-like receiver id=3285926 bin=GWA2_Elusimicrobia_66_18 species=uncultured myxobacterium HF0200_05J13 genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
spo0F1; DNA-binding response regulator
Tax=GWC2_Elusimicrobia_65_9_curated
14_0903_13_30cm_scaffold_1072664_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(21338..23014)
DNA (1677bp) protein (559aa)
Serine phosphatase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026C0_SOLUE
serine phosphatase
Serine phosphatase {ECO:0000313|EMBL:ABJ83149.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0903_13_30cm_scaffold_1072664_23
unknown

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comp(23134..23439)
DNA (306bp) protein (102aa)

This feature has no annotations

14_0903_13_30cm_scaffold_1072664_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23771..26548)
DNA (2778bp) protein (926aa)
Peptidase S16B family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA51_GEMAT
peptidase M16 domain protein
Peptidase M16 domain protein {ECO:0000313|EMBL:AHG91744.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0903_13_30cm_scaffold_1072664_25
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

26746..27303
DNA (558bp) protein (186aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Displaying 25 items

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