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14_0903_13_30cm_scaffold_1444079

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_13_30cm_scaffold_1444079_1
unknown

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3..86
DNA (84bp) protein (28aa)

This feature has no annotations

14_0903_13_30cm_scaffold_1444079_2
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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86..736
DNA (651bp) protein (217aa)
ABC-type uncharacterized transport system n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VKY4_9CYAN
ABC-type uncharacterized transport system
ABC-type uncharacterized transport system {ECO:0000313|EMBL:AFZ08152.1}; Flags: Precursor;; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
14_0903_13_30cm_scaffold_1444079_3
RBG_16_RIF05_58_8_curated, RIF5, Bacteria

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702..1619
DNA (918bp) protein (306aa)
gliding motility ABC transporter auxillary protein id=14626739 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ABC transporter
Tax=RBG_16_RIF05_58_8_curated
14_0903_13_30cm_scaffold_1444079_4
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

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1623..3050
DNA (1428bp) protein (476aa)
hypothetical protein id=14626738 bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RBG_13_Caldithrix_44_9_curated
14_0903_13_30cm_scaffold_1444079_5
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3209..3691
DNA (483bp) protein (161aa)
Ribosome maturation factor RimP id=2244617 bin=GWB2_Proteobacteria_55_19 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
Tax=GWB2_Deltaproteobacteria_55_19_curated
14_0903_13_30cm_scaffold_1444079_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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3736..5178
DNA (1443bp) protein (481aa)
NusA antitermination factor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W32_SOLUE
NusA antitermination factor
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
14_0903_13_30cm_scaffold_1444079_7
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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5612..8287
DNA (2676bp) protein (892aa)
Translation initiation factor IF-2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=IF2_SOLUE
translation initiation factor 2
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
14_0903_13_30cm_scaffold_1444079_8
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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8324..8611
DNA (288bp) protein (96aa)
hypothetical protein; K09764 hypothetical protein id=24423469 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
14_0903_13_30cm_scaffold_1444079_9
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8858..9238
DNA (381bp) protein (127aa)
Ribosome-binding factor A n=1 Tax=Thermincola potens (strain JR) RepID=D5XF14_THEPJ
ribosome-binding factor A
Tax=RBG_13_Deltaproteobacteria_65_10_curated
14_0903_13_30cm_scaffold_1444079_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

9696..10427
DNA (732bp) protein (244aa)
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Aquaspirillum serpens RepID=UPI0003B36C8A
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
14_0903_13_30cm_scaffold_1444079_11
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10991..11287)
DNA (297bp) protein (99aa)
competence protein ComEA-like protein with helix-hairpin-helix repeat region id=12554119 bin=CNBR_ACIDO species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
competence protein ComEA-like protein with helix-hairpin-helix repeat region
Competence protein ComEA-like protein with helix-hairpin-helix repeat region {ECO:0000313|EMBL:AEV69575.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
14_0903_13_30cm_scaffold_1444079_12
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11866..13026
DNA (1161bp) protein (387aa)
Tetratricopeptide TPR_2 repeat protein id=2284843 bin=GWB2_Clostridiales_37_7 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
14_0903_13_30cm_scaffold_1444079_13
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

13002..13868
DNA (867bp) protein (289aa)
Tetratricopeptide repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHP7_KORVE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
14_0903_13_30cm_scaffold_1444079_14
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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14349..15236
DNA (888bp) protein (296aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJA7_CHLTF
14_0903_13_30cm_scaffold_1444079_trna_1
unknown

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15394..15465
DNA (72bp)
transferRNA Gln
14_0903_13_30cm_scaffold_1444079_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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15502..16461
DNA (960bp) protein (320aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHW0_KORVE
ribose-phosphate pyrophosphokinase
14_0903_13_30cm_scaffold_1444079_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


16869..17231
DNA (363bp) protein (121aa)
50S ribosomal protein L25 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHW1_KORVE
50S ribosomal protein L25
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Displaying 17 items

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