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14_0903_13_30cm_scaffold_3458830

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_13_30cm_scaffold_3458830_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..629)
DNA (627bp) protein (209aa)
Putative vitamin B12 transport protein BtuC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5M8_GEMAT
btuD; putative vitamin B12 transport protein BtuC
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_13_30cm_scaffold_3458830_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(626..1519)
DNA (894bp) protein (298aa)
ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G9_GEMAT
ABC transporter substrate-binding protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_13_30cm_scaffold_3458830_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1999..2367)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFX4_SINAD
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_13_30cm_scaffold_3458830_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2383..3288)
DNA (906bp) protein (302aa)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_13_30cm_scaffold_3458830_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3341..3868)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G7_GEMAT
protein of unknown function DUF151
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_13_30cm_scaffold_3458830_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3850..4407)
DNA (558bp) protein (186aa)
sahH; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase id=2244673 bin=GWB2_Proteobacteria_55_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_13_30cm_scaffold_3458830_7
unknown

Not on your lists

4726..5172
DNA (447bp) protein (149aa)

This feature has no annotations

14_0903_13_30cm_scaffold_3458830_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5145..6161)
DNA (1017bp) protein (339aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S-adenosylmethionine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G6_GEMAT
14_0903_13_30cm_scaffold_3458830_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(6199..6306)
DNA (108bp) protein (36aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
S-adenosylmethionine synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VU0_SOLUE
14_0903_13_30cm_scaffold_3458830_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6339..8066)
DNA (1728bp) protein (576aa)
ptsI; phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G5_GEMAT
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_13_30cm_scaffold_3458830_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8063..8404)
DNA (342bp) protein (114aa)
ptsH; phosphocarrier protein HPr; K11189 phosphocarrier protein id=7200581 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
ptsH; phosphocarrier protein HPr
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_13_30cm_scaffold_3458830_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8395..8892)
DNA (498bp) protein (166aa)
Phosphotransferase system enzyme IID component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G3_GEMAT
PTS system mannose/fructose/sorbose family IID component
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_13_30cm_scaffold_3458830_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9092..9769)
DNA (678bp) protein (226aa)
Putative phosphotransferase system enzyme IIC component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G2_GEMAT
phosphotransferase system PTS sorbose-specific IIC subunit
Phosphotransferase system PTS sorbose-specific IIC subunit {ECO:0000313|EMBL:AHG90661.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0903_13_30cm_scaffold_3458830_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9766..10185)
DNA (420bp) protein (140aa)
Phosphotransferase system enzyme IIB component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G1_GEMAT
phosphotransferase system enzyme IIB component
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_13_30cm_scaffold_3458830_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10203..10556)
DNA (354bp) protein (118aa)
Phosphotransferase system enzyme IIA component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G0_GEMAT
phosphotransferase system enzyme IIA component
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_13_30cm_scaffold_3458830_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10549..11517)
DNA (969bp) protein (323aa)
HPr kinase/phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F9_GEMAT
hprK; HPr kinase/phosphorylase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_13_30cm_scaffold_3458830_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11514..11837)
DNA (324bp) protein (108aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_13_30cm_scaffold_3458830_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11841..12473)
DNA (633bp) protein (211aa)
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F8_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_13_30cm_scaffold_3458830_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12490..12894)
DNA (405bp) protein (135aa)
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F8_GEMAT
glycosyl transferase group 1
Glycosyl transferase group 1 {ECO:0000313|EMBL:AHG90656.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0903_13_30cm_scaffold_3458830_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12891..13304)
DNA (414bp) protein (138aa)
N utilization substance protein B homolog n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=NUSB_SOLUE
N utilization substance protein B-like protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_13_30cm_scaffold_3458830_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13285..13725)
DNA (441bp) protein (147aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WQB4_KYRT2
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_13_30cm_scaffold_3458830_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13773..14762)
DNA (990bp) protein (330aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F5_GEMAT
3,4-dihydroxy-2-butanone 4-phosphate synthase
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_13_30cm_scaffold_3458830_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14895..15503)
DNA (609bp) protein (203aa)
ribE; riboflavin synthase alpha chain (EC:2.5.1.9)
Riboflavin synthase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F4_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_13_30cm_scaffold_3458830_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(15485..16501)
DNA (1017bp) protein (339aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PRW1_9FIRM
riboflavin biosynthesis protein RibD
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_13_30cm_scaffold_3458830_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16464..17426)
DNA (963bp) protein (321aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90650.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0903_13_30cm_scaffold_3458830_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17486..17986)
DNA (501bp) protein (167aa)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F1_GEMAT
phosphoribosylformylglycinamidine cyclo-ligase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_13_30cm_scaffold_3458830_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17980..18438)
DNA (459bp) protein (153aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] id=12554515 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphoribosylformylglycinamidine cyclo-ligase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_13_30cm_scaffold_3458830_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18435..19139)
DNA (705bp) protein (235aa)
PfkB family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F0_GEMAT
PfkB family protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 28 items

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