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14_0903_13_30cm_scaffold_1861244

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_13_30cm_scaffold_1861244_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

3..389
DNA (387bp) protein (129aa)
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor id=12555339 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
signal recognition particle-docking protein FtsY
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_13_30cm_scaffold_1861244_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

709..1467
DNA (759bp) protein (253aa)
riboflavin biosynthesis protein RibD id=12555338 bin=CNBR_ACIDO species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribD; riboflavin biosynthesis protein RibD
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_13_30cm_scaffold_1861244_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

1448..2053
DNA (606bp) protein (202aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] id=12555337 bin=CNBR_ACIDO species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
riboflavin synthase, subunit alpha (EC:2.5.1.9)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_13_30cm_scaffold_1861244_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2053..3270
DNA (1218bp) protein (406aa)
GTP cyclohydrolase II; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] id=12555336 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
riboflavin biosynthesis GTP cyclohydrolase II RibA (EC:3.5.4.25)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_13_30cm_scaffold_1861244_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


3551..4765
DNA (1215bp) protein (405aa)
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 id=12555334 bin=CNBR_ACIDO species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
signal recognition particle subunit FFH/SRP54 (srp54)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_13_30cm_scaffold_1861244_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


4810..5124
DNA (315bp) protein (105aa)
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=12555333 bin=CNBR_ACIDO species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S16
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_13_30cm_scaffold_1861244_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

5121..5366
DNA (246bp) protein (82aa)
hypothetical protein; K06960 id=12555332 bin=CNBR_ACIDO species=Clostridium sp. CAG:43 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_13_30cm_scaffold_1861244_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

5366..5887
DNA (522bp) protein (174aa)
16S rRNA-processing protein RimM id=12555331 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
16S rRNA-processing protein RimM
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_13_30cm_scaffold_1861244_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

5987..6643
DNA (657bp) protein (219aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] id=14430513 bin=bin3_NC10 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=bin3_NC10 organism_group=NC10
trmD; tRNA (guanine-N(1)-)-methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_13_30cm_scaffold_1861244_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


6699..7037
DNA (339bp) protein (113aa)
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 id=12555329 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L19
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_13_30cm_scaffold_1861244_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7045..7668
DNA (624bp) protein (208aa)
ribonuclease h (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=12555328 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribonuclease HII
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_13_30cm_scaffold_1861244_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7714..9660
DNA (1947bp) protein (649aa)
Tetratricopeptide repeat protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF9_CHLTF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_13_30cm_scaffold_1861244_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

9862..10542
DNA (681bp) protein (227aa)
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase id=2198888 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_13_30cm_scaffold_1861244_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10539..11357
DNA (819bp) protein (273aa)
hypothetical protein id=12555325 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
XRE family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_13_30cm_scaffold_1861244_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

11427..12137
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJZ5_CHLTF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_13_30cm_scaffold_1861244_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12141..13811
DNA (1671bp) protein (557aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037444FC
Uncharacterized protein {ECO:0000313|EMBL:KCZ70522.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
14_0903_13_30cm_scaffold_1861244_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13750..13992)
DNA (243bp) protein (81aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying 17 items

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