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14_0903_13_30cm_scaffold_1410600

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Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_13_30cm_scaffold_1410600_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

85..2313
DNA (2229bp) protein (743aa)
UvrABC system protein B n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1F3_9BACT
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
excinuclease ABC subunit B
14_0903_13_30cm_scaffold_1410600_2
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2511..3770
DNA (1260bp) protein (420aa)
DNA polymerase III, delta subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1F9_9BACT
DNA polymerase III subunit delta
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0903_13_30cm_scaffold_1410600_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3811..4254)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D099_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20413.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_0903_13_30cm_scaffold_1410600_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

4371..5048
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCI6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY15862.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
14_0903_13_30cm_scaffold_1410600_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5069..6133
DNA (1065bp) protein (355aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
3-dehydroquinate synthase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174537E
3-dehydroquinate synthase
14_0903_13_30cm_scaffold_1410600_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6161..7462)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAY2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16356.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
14_0903_13_30cm_scaffold_1410600_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7738..8592
DNA (855bp) protein (285aa)
Metallophosphoesterase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D067_9BACT
Metallophosphoesterase {ECO:0000313|EMBL:EDY20381.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
metallophosphoesterase
14_0903_13_30cm_scaffold_1410600_8
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

8669..9304
DNA (636bp) protein (212aa)
hypothetical protein, partial n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI000369835E
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ADO82573.1}; Flags: Precursor;; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain DSM 2926 / CuHBu1).;"
14_0903_13_30cm_scaffold_1410600_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9321..9821)
DNA (501bp) protein (167aa)
Translation initiation factor IF-3 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8Q4_9BACT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
infC; translation initiation factor IF-3
14_0903_13_30cm_scaffold_1410600_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10145..10804)
DNA (660bp) protein (220aa)
DSBA oxidoreductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCK0_9BACT
DSBA oxidoreductase {ECO:0000313|EMBL:EEF62668.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
14_0903_13_30cm_scaffold_1410600_11
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

10940..11944
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034BD5C0
Uncharacterized protein {ECO:0000313|EMBL:KIJ80704.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
rhomboid family protein
14_0903_13_30cm_scaffold_1410600_12
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

12175..14730
DNA (2556bp) protein (852aa)
Alpha-glucan phosphorylase n=2 Tax=Geobacter sulfurreducens RepID=D7AEB8_GEOSK
alpha-glucan phosphorylase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0903_13_30cm_scaffold_1410600_13
unknown

Not on your lists

comp(14910..15116)
DNA (207bp) protein (69aa)

This feature has no annotations

14_0903_13_30cm_scaffold_1410600_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15495..16235)
DNA (741bp) protein (247aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYJ9_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EDY20540.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
LuxR family two component transcriptional regulator
14_0903_13_30cm_scaffold_1410600_15
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16232..17938)
DNA (1707bp) protein (569aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
two-component sensor histidine kinase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746826
PAS/PAC sensor signal transduction histidine kinase
14_0903_13_30cm_scaffold_1410600_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(18344..19957)
DNA (1614bp) protein (538aa)
type I phosphodiesterase (EC:3.-.-.-)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSR7_9BACT
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EEF57119.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
14_0903_13_30cm_scaffold_1410600_17

Not on your lists

comp(20102..21454)
DNA (1353bp) protein (451aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBP2_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49086.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
EmrB/QacA family drug resistance transporter
14_0903_13_30cm_scaffold_1410600_18
unknown

Not on your lists

21648..22661
DNA (1014bp) protein (338aa)

This feature has no annotations

14_0903_13_30cm_scaffold_1410600_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

22813..23460
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYY6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20677.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
14_0903_13_30cm_scaffold_1410600_20
Wolinella succinogenes, Wolinella, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

23759..24358
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) RepID=Q7MR40_WOLSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE10767.1}; TaxID=273121 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Wolinella.;" source="Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC; 11488 / FDC 602W) (Vibrio succinogenes).;"
14_0903_13_30cm_scaffold_1410600_21
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(24462..24836)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000376ACCA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
14_0903_13_30cm_scaffold_1410600_22
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

25020..26369
DNA (1350bp) protein (450aa)
2-polyprenyl-6-methoxyphenol hydroxylase-like FAD-dependent oxidoreductase (EC:1.14.13.9)
Kynurenine 3-monooxygenase {ECO:0000256|HAMAP-Rule:MF_01971}; EC=1.14.13.9 {ECO:0000256|HAMAP-Rule:MF_01971};; Kynurenine 3-hydroxylase {ECO:0000256|HAMAP-Rule:MF_01971}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Kynurenine 3-monooxygenase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJF3_CHLTF
14_0903_13_30cm_scaffold_1410600_23
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26409..26927
DNA (519bp) protein (173aa)
Putative FAD-dependent oxygenase n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NIB2_9ACTO
Putative FAD-dependent oxygenase {ECO:0000313|EMBL:EGG46748.1}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
hypothetical protein
14_0903_13_30cm_scaffold_1410600_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

27067..27510
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0G7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19829.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
14_0903_13_30cm_scaffold_1410600_25
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

27665..28951
DNA (1287bp) protein (429aa)
Rieske (2Fe-2S) domain protein n=2 Tax=Chloroflexus RepID=A9WGM6_CHLAA
Rieske (2Fe-2S) domain-containing protein
Tax=RBG_16_Chloroflexi_54_18_curated
14_0903_13_30cm_scaffold_1410600_26
Gemmata sp. Wa1-1, Gemmata, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

29052..29837
DNA (786bp) protein (262aa)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan oxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan pyrrolase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophanase {ECO:0000256|HAMAP-Rule:MF_01972}; TaxID=235140 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gemmata.;" source="Gemmata sp. Wa1-1.;"
Tryptophan 2,3-dioxygenase n=1 Tax=Gemmata sp. Wa1-1 RepID=Q6W756_9PLAN
tryptophan 23-dioxygenase
14_0903_13_30cm_scaffold_1410600_27
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29923..30978)
DNA (1056bp) protein (352aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FKP1_9BACT
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase {ECO:0000313|EMBL:AKD05573.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
14_0903_13_30cm_scaffold_1410600_28
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31032..31565)
DNA (534bp) protein (178aa)
3-hydroxyanthranilate 3,4-dioxygenase (EC:1.13.11.6)
3-hydroxyanthranilate 3,4-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; EC=1.13.11.6 {ECO:0000256|HAMAP-Rule:MF_00825};; 3-hydroxyanthranilate oxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; 3-hydroxyanthranilic acid dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
3-hydroxyanthranilate 3,4-dioxygenase n=1 Tax=Pontibacter roseus RepID=UPI00035D0689
14_0903_13_30cm_scaffold_1410600_29
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

31746..32315
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746B46
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EDY20358.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ErfK/YbiS/YcfS/YnhG family protein
14_0903_13_30cm_scaffold_1410600_30
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

32504..33673
DNA (1170bp) protein (390aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D365_9BACT
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:EDY19176.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
Displaying items 1-30 of 48 in total

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