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14_0903_16_40cm_scaffold_4006

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_16_40cm_scaffold_4006_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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3..359
DNA (357bp) protein (119aa)
ABC transporter permease n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI000362E903
putative iron(III)-transport system permease
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
14_0903_16_40cm_scaffold_4006_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

472..1272
DNA (801bp) protein (267aa)
Uncharacterized protein id=2107851 bin=GWD2_Deltaproteobacteria_55_8 species=Anaerobaculum mobile genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
4,5-dihydroxyphthalate decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
14_0903_16_40cm_scaffold_4006_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1349..1771
DNA (423bp) protein (141aa)
Putative F420-dependent enzyme n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLS3_9CHLR
nitroreductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
14_0903_16_40cm_scaffold_4006_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1778..3133)
DNA (1356bp) protein (452aa)
Putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF29_9BACT
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
14_0903_16_40cm_scaffold_4006_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3417..3794)
DNA (378bp) protein (126aa)
response regulator receiver protein id=14430354 bin=bin3_NC10 species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
response regulator receiver protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
14_0903_16_40cm_scaffold_4006_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3891..8366)
DNA (4476bp) protein (1492aa)
UPI0003CF288E related cluster n=1 Tax=unknown RepID=UPI0003CF288E
sensor histidine kinase protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
14_0903_16_40cm_scaffold_4006_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8320..8967)
DNA (648bp) protein (216aa)
UPI0003CE9C5A related cluster n=1 Tax=unknown RepID=UPI0003CE9C5A
sensor histidine kinase protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
14_0903_16_40cm_scaffold_4006_8
unknown

Not on your lists

comp(9426..9902)
DNA (477bp) protein (159aa)

This feature has no annotations

14_0903_16_40cm_scaffold_4006_9
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10777..11181)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000376F23B
glyoxalase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
14_0903_16_40cm_scaffold_4006_10
unknown

Not on your lists

comp(11393..11806)
DNA (414bp) protein (138aa)

This feature has no annotations

14_0903_16_40cm_scaffold_4006_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11956..12774)
DNA (819bp) protein (273aa)
Response regulator receiver protein id=2142560 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
response regulator receiver protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
14_0903_16_40cm_scaffold_4006_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12855..13202)
DNA (348bp) protein (116aa)
Cupin domain-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XF57_VARPD
cupin region
Cupin domain-containing protein {ECO:0000313|EMBL:AGU50740.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
14_0903_16_40cm_scaffold_4006_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(13347..13667)
DNA (321bp) protein (107aa)
hypothetical protein
hypothetical protein id=5079167 bin=GWF1_Burkholderiales_GWF1_66_17 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
14_0903_16_40cm_scaffold_4006_14
unknown

Not on your lists

13972..14328
DNA (357bp) protein (119aa)

This feature has no annotations

14_0903_16_40cm_scaffold_4006_15
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14472..15290)
DNA (819bp) protein (273aa)
GCN5-related N-acetyltransferase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IDJ8_METNO
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACL61364.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
Displaying 15 items

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