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14_0919_02_20cm_scaffold_35

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Displaying items 1-30 of 76 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0919_02_20cm_scaffold_35_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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40..252
DNA (213bp) protein (71aa)
rpmE; 50S ribosomal protein L31
50S ribosomal protein L31 id=3650204 bin=GWA2_Ignavibacteriae_54_16_partial species=Treponema sp. JC4 genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_35_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

256..1314
DNA (1059bp) protein (353aa)
Peptide chain release factor 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L6_GEMAT
Peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0919_02_20cm_scaffold_35_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1307..2212
DNA (906bp) protein (302aa)
Release factor glutamine methyltransferase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YVM8_9ACTN
protein-(glutamine-N5) methyltransferase, release factor-specific
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_35_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2209..2562
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L8_GEMAT
protein of unknown function DUF964
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_35_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2562..3191
DNA (630bp) protein (210aa)
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5STM7_9BACT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_35_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3188..4807
DNA (1620bp) protein (540aa)
Carboxyl-terminal processing protease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M0_GEMAT
carboxyl-terminal protease
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_35_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4809..5687
DNA (879bp) protein (293aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQA9_ROSCS
NADP oxidoreductase coenzyme F420-dependent
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_35_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

5769..6581
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PDV0_9CYAN id=5225296 bin=16ft_combo_ws3_JS1 species=Calothrix sp. PCC 7507 genus=Calothrix taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
14_0919_02_20cm_scaffold_35_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

6578..6772
DNA (195bp) protein (65aa)
ptsN; PTS family fructose/mannitol (fru) porter component IIA; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] id=24490873 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Flexithrix dorotheae genus=Flexithrix taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ptsN; PTS family fructose/mannitol (fru) porter component IIA
Tax=RBG_16_RIF_WS3X_71_46_curated
14_0919_02_20cm_scaffold_35_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6938..7684)
DNA (747bp) protein (249aa)
Outer-membrane lipoprotein carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M2_GEMAT
lolA; outer-membrane lipoprotein carrier protein precursor
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_35_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7704..8744)
DNA (1041bp) protein (347aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M3_GEMAT
phospho-2-dehydro-3-deoxyheptonate aldolase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_35_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8747..9514)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M4_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0919_02_20cm_scaffold_35_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9515..13000)
DNA (3486bp) protein (1162aa)
Chromosome partition protein Smc n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M6_GEMAT
chromosome segregation protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0919_02_20cm_scaffold_35_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12997..14274)
DNA (1278bp) protein (426aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0919_02_20cm_scaffold_35_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14271..15542)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38238.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_0919_02_20cm_scaffold_35_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15807..18998)
DNA (3192bp) protein (1064aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N3_GEMAT
surface antigen (D15)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_35_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19004..19384)
DNA (381bp) protein (127aa)
Ribosomal silencing factor RsfS n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N4_GEMAT
iojap-like protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0919_02_20cm_scaffold_35_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(19453..19896)
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL9_GEMAT
50S ribosomal protein L9
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0919_02_20cm_scaffold_35_19
unknown

Not on your lists

comp(19913..20461)
DNA (549bp) protein (183aa)

This feature has no annotations

14_0919_02_20cm_scaffold_35_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(20485..20706)
DNA (222bp) protein (74aa)
30S ribosomal protein S18 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N7_GEMAT
rpsR; 30S ribosomal protein S18
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0919_02_20cm_scaffold_35_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(20703..21074)
DNA (372bp) protein (124aa)
30S ribosomal protein S6 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N8_GEMAT
rpsF; 30S ribosomal protein S6
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0919_02_20cm_scaffold_35_22
unknown

Not on your lists

21347..21973
DNA (627bp) protein (209aa)

This feature has no annotations

14_0919_02_20cm_scaffold_35_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22018..22287
DNA (270bp) protein (90aa)
ThiamineS n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LNQ2_HALO1
sulfur transfer protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_35_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22284..23405
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LNQ3_HALO1 rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_35_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23421..24464)
DNA (1044bp) protein (348aa)
Ribosome-binding ATPase YchF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7P0_GEMAT
GTP-binding protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_35_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24603..25136)
DNA (534bp) protein (178aa)
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PTH_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0919_02_20cm_scaffold_35_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(25140..25907)
DNA (768bp) protein (256aa)
50S ribosomal protein L25 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Q0_GEMAT
rplY; 50S ribosomal protein L25
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0919_02_20cm_scaffold_35_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25939..26892)
DNA (954bp) protein (318aa)
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Q1_GEMAT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_35_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26937..27860)
DNA (924bp) protein (308aa)
hypothetical protein id=14626738 bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_35_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(27857..30106)
DNA (2250bp) protein (750aa)
Gliding-associated ABC transporter substrate-binding protein GldG n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RUE8_9BACT
gliding-associated ABC transporter substrate-binding protein GldG
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying items 1-30 of 76 in total

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