ggKbase home page

14_0919_02_20cm_scaffold_309

Search features with annotation key words

Displaying items 1-30 of 53 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0919_02_20cm_scaffold_309_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..1572)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T8_GEMAT
Ig domain protein group 2 domain protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:AHG91641.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0919_02_20cm_scaffold_309_2
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2299..3111
DNA (813bp) protein (271aa)
formyl transferase n=1 Tax=Schlesneria paludicola RepID=UPI00029A8E05 rbh
hypothetical protein
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO45443.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
14_0919_02_20cm_scaffold_309_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

3083..3901
DNA (819bp) protein (273aa)
Polysaccharide deacetylase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NR5_SOLUE
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ABJ88705.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0919_02_20cm_scaffold_309_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3935..4549)
DNA (615bp) protein (205aa)
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase {ECO:0000313|EMBL:BAH37627.1}; EC=2.4.-.- {ECO:0000313|EMBL:BAH37627.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W7_GEMAT
14_0919_02_20cm_scaffold_309_5
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

4981..6261
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L556_MAGSM
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
14_0919_02_20cm_scaffold_309_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6274..7095)
DNA (822bp) protein (274aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5V9_GEMAT
ATP-binding region ATPase domain protein
14_0919_02_20cm_scaffold_309_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7110..8714)
DNA (1605bp) protein (535aa)
NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W0_GEMAT
sigma-54 factor interaction domain-containing protein
NtrC family two-component response regulator {ECO:0000313|EMBL:BAH37620.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_0919_02_20cm_scaffold_309_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9017..11458
DNA (2442bp) protein (814aa)
Putative exopolysaccharide biosynthesis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W1_GEMAT
putative exopolysaccharide biosynthesis protein
Putative exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:BAH37621.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_0919_02_20cm_scaffold_309_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11455..12420)
DNA (966bp) protein (322aa)
Response regulator/GGDEF domain-containing protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CPM4_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90034.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0919_02_20cm_scaffold_309_10
unknown

Not on your lists

12641..12751
DNA (111bp) protein (37aa)

This feature has no annotations

14_0919_02_20cm_scaffold_309_11
unknown

Not on your lists

12732..12953
DNA (222bp) protein (74aa)

This feature has no annotations

14_0919_02_20cm_scaffold_309_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12957..14783
DNA (1827bp) protein (609aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB63_GEMAT
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0919_02_20cm_scaffold_309_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14788..15423
DNA (636bp) protein (212aa)
Periplasmic polysaccharide biosynthesis/export protein n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AJS2_GEOSK
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_309_14
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

15428..16591
DNA (1164bp) protein (388aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Schlesneria paludicola RepID=UPI00029B1174
Tax=RBG_16_Chloroflexi_57_11_curated
14_0919_02_20cm_scaffold_309_15
unknown

Not on your lists

16946..17629
DNA (684bp) protein (228aa)

This feature has no annotations

14_0919_02_20cm_scaffold_309_16
unknown

Not on your lists

17688..18401
DNA (714bp) protein (238aa)

This feature has no annotations

14_0919_02_20cm_scaffold_309_17
unknown

Not on your lists

18731..19276
DNA (546bp) protein (182aa)

This feature has no annotations

14_0919_02_20cm_scaffold_309_18
unknown

Not on your lists

19325..20008
DNA (684bp) protein (228aa)

This feature has no annotations

14_0919_02_20cm_scaffold_309_19
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

20251..21159
DNA (909bp) protein (303aa)
Anti-sigma-factor antagonist id=4337253 bin=GWC2_Ignavibacteria_56_12 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
anti-sigma-factor antagonist
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
14_0919_02_20cm_scaffold_309_20
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

21191..21583
DNA (393bp) protein (131aa)
Antagonist protein RsbS id=4927122 bin=GWA2_Ignavibacteria_55_11 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
rsbS; putative sigma activity regulator RsbS
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
14_0919_02_20cm_scaffold_309_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21576..21986
DNA (411bp) protein (137aa)
Anti-sigma regulatory factor (Ser/Thr protein kinase) {ECO:0000313|EMBL:KCZ71458.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative anti-sigma regulatory factor, serine/threonine protein kinase id=4927123 bin=GWA2_Ignavibacteria_55_11 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
anti-sigma regulatory factor, serine/threonine protein kinase
14_0919_02_20cm_scaffold_309_22
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

21979..22620
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003683974
protein serine/threonine phosphatase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
14_0919_02_20cm_scaffold_309_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

22617..24035
DNA (1419bp) protein (473aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=2304889 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acetoacetate metabolism regulatory protein AtoC
Tax=GWA2_Rokubacteria_73_35_curated
14_0919_02_20cm_scaffold_309_24
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

24032..25591
DNA (1560bp) protein (520aa)
Predicted ATPase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EWC7_9BACT
Predicted ATPase
Predicted ATPase {ECO:0000313|EMBL:CCW33988.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
14_0919_02_20cm_scaffold_309_25
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25588..27231
DNA (1644bp) protein (548aa)
Amidase {ECO:0000313|EMBL:KFA93449.1}; EC=3.5.1.4 {ECO:0000313|EMBL:KFA93449.1};; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
Amidotransferase-related protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PGG0_9DELT
gatA2; amidase
14_0919_02_20cm_scaffold_309_26
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(27212..27811)
DNA (600bp) protein (200aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] id=14431486 bin=bin3_NC10 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
tag; 3-methyladenine DNA glycosylase
Tax=CSP1_5_NC10
14_0919_02_20cm_scaffold_309_27
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27888..28847
DNA (960bp) protein (320aa)
Quinone oxidoreductase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U1B8_9RHOB
Quinone oxidoreductase {ECO:0000313|EMBL:EAQ02101.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
NAD(P)H quinone oxidoreductase
14_0919_02_20cm_scaffold_309_28
Tatlockia micdadei, Tatlockia, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28900..30027
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39N69_BURS3
conserved protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CEG59969.1}; TaxID=451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Tatlockia.;" source="Tatlockia micdadei (Legionella micdadei).;"
14_0919_02_20cm_scaffold_309_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

30143..30919
DNA (777bp) protein (259aa)
hypothetical protein; K00540 [EC:1.-.-.-] id=24472762 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0919_02_20cm_scaffold_309_30
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(30916..31914)
DNA (999bp) protein (333aa)
2-nitropropane dioxygenase id=3531975 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good rbh
putative oxidoreductase rbh
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying items 1-30 of 53 in total

View Taxonomy