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14_0919_02_20cm_scaffold_727

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0919_02_20cm_scaffold_727_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2..121
DNA (120bp) protein (40aa)
SecD export membrane protein
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0919_02_20cm_scaffold_727_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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123..1151
DNA (1029bp) protein (343aa)
Protein translocase subunit SecF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECF_GEMAT
secF; protein-export membrane protein SecF
Protein translocase subunit SecF; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_0919_02_20cm_scaffold_727_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

1153..1923
DNA (771bp) protein (257aa)
Putative DNase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P4_GEMAT
hydrolase, TatD family
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0919_02_20cm_scaffold_727_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1936..3618
DNA (1683bp) protein (561aa)
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE57_GEMAT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_727_5
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3618..4010
DNA (393bp) protein (131aa)
Endoribonuclease L-PSP, putative id=4679987 bin=GWA2_OP3_53_43 species=Synechococcus sp. PCC 7335 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
endoribonuclease L-PSP
Tax=GWC2_Geobacteraceae_53_11_curated
14_0919_02_20cm_scaffold_727_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4007..5422
DNA (1416bp) protein (472aa)
Peptidase M20 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AW5_SOLUE
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_727_7
unknown

Not on your lists

5480..6763
DNA (1284bp) protein (428aa)

This feature has no annotations

14_0919_02_20cm_scaffold_727_8
unknown

Not on your lists

6760..8256
DNA (1497bp) protein (499aa)

This feature has no annotations

14_0919_02_20cm_scaffold_727_trna_1
unknown

Not on your lists

8340..8429
DNA (90bp)
transferRNA SeC(p)
14_0919_02_20cm_scaffold_727_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8878..9930
DNA (1053bp) protein (351aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_727_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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10007..10357
DNA (351bp) protein (117aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0919_02_20cm_scaffold_727_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10367..11656)
DNA (1290bp) protein (430aa)
Threonine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A850_GEMAT
threonine synthase
Threonine synthase {ECO:0000313|EMBL:AHG89128.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0919_02_20cm_scaffold_727_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11653..14172)
DNA (2520bp) protein (840aa)
aspartokinase/homoserine dehydrogenase (EC:1.1.1.3 2.7.2.4)
Aspartokinase/homoserine dehydrogenase {ECO:0000313|EMBL:BAH38409.1}; EC=1.1.1.3 {ECO:0000313|EMBL:BAH38409.1};; EC=2.7.2.4 {ECO:0000313|EMBL:BAH38409.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Aspartokinase/homoserine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A849_GEMAT
14_0919_02_20cm_scaffold_727_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14177..15106)
DNA (930bp) protein (310aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Homoserine kinase n=1 Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=KHSE_SYNP2
Homoserine kinase
14_0919_02_20cm_scaffold_727_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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15282..16331
DNA (1050bp) protein (350aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate semialdehyde dehydrogenase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF1_CHLTF
14_0919_02_20cm_scaffold_727_15
Podospora anserina, Podospora, Sordariales, Sordariomycetidae, Ascomycota, Fungi

Not on your lists

16467..17372
DNA (906bp) protein (302aa)
Membrane glycoprotein n=1 Tax=Equid herpesvirus 1 RepID=O39781_9ALPH
Uncharacterized protein {ECO:0000313|EMBL:CDP24287.1}; TaxID=515849 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Lasiosphaeriaceae; Podospora.;" source="Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383); (Pleurage anserina).;"
cell wall surface anchor family protein
14_0919_02_20cm_scaffold_727_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17591..18382
DNA (792bp) protein (264aa)
Diacylglycerol kinase catalytic region n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GAG1_CHLAD
diacylglycerol kinase catalytic subunit
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0919_02_20cm_scaffold_727_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18379..18861
DNA (483bp) protein (161aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_727_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18858..19658
DNA (801bp) protein (267aa)
Glutamate racemase
Glutamate racemase id=4937759 bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0919_02_20cm_scaffold_727_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19907..20407)
DNA (501bp) protein (167aa)
metallophosphoesterase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] id=24407690 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Calcineurin-like phosphoesterase superfamily domain protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_727_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20467..20883
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DA38_9BACL
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_727_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20937..21656
DNA (720bp) protein (240aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_727_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21709..22122
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q1_GEMAT
Rare lipoprotein B
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_727_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22119..22487
DNA (369bp) protein (123aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_727_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22525..23772
DNA (1248bp) protein (416aa)
Na+/H+-exchanging protein id=5019909 bin=GWA2_Elusimicrobia_69_24 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Kef-type K+ transport system membrane protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_727_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

23769..24251
DNA (483bp) protein (161aa)
Bifunctional protein HldE n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GTQ0_9GAMM
D-heptose-7-phosphate 1-kinase,D-heptose-1-phosphate adenylyltransferase
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0919_02_20cm_scaffold_727_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


24278..24898
DNA (621bp) protein (207aa)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQF7_9FIRM
Nucleoside-triphosphatase rdgB
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_727_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24912..25232)
DNA (321bp) protein (107aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_727_trna_2
unknown

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25363..25436
DNA (74bp)
transferRNA Pro
14_0919_02_20cm_scaffold_727_28
unknown

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26087..26572
DNA (486bp) protein (162aa)

This feature has no annotations

Displaying 30 items

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