ggKbase home page

14_0919_05_20cm_scaffold_4729

Search features with annotation key words

Displaying items 1-30 of 31 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0919_05_20cm_scaffold_4729_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2..2029
DNA (2028bp) protein (676aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1BRN2_9NEIS
type IV fimbrial biogenesis PilY1-like protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0919_05_20cm_scaffold_4729_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2059..2961
DNA (903bp) protein (301aa)
TPR repeat-containing protein n=1 Tax=Cyanothece sp. (strain PCC 8801) RepID=B7K3M3_CYAP8
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0919_05_20cm_scaffold_4729_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2964..3608
DNA (645bp) protein (215aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_0919_05_20cm_scaffold_4729_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3650..5077
DNA (1428bp) protein (476aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRB0_KORVE
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_0919_05_20cm_scaffold_4729_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5130..6218)
DNA (1089bp) protein (363aa)
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] id=12555531 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
aroB; 3-dehydroquinate synthase (EC:4.2.3.4) rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_0919_05_20cm_scaffold_4729_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


6457..9456
DNA (3000bp) protein (1000aa)
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] id=24408285 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
proS; Proline--tRNA ligase (EC:6.1.1.15) rbh
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_0919_05_20cm_scaffold_4729_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9460..10272)
DNA (813bp) protein (271aa)
Sec-independent protein translocase protein TatC n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DNB7_DESVM
Sec-independent protein translocase subunit TatC
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_0919_05_20cm_scaffold_4729_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10285..10560)
DNA (276bp) protein (92aa)
sec-independent translocation protein mttA/Hcf106; K03116 sec-independent protein translocase protein TatA id=12555527 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Sec-independent protein translocase protein TatA/E
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_0919_05_20cm_scaffold_4729_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

10660..12279
DNA (1620bp) protein (540aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=12555525 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
carboxyl-terminal protease
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_0919_05_20cm_scaffold_4729_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

12572..16357
DNA (3786bp) protein (1262aa)
smc; chromosome segregation protein SMC; K03529 chromosome segregation protein id=12555524 bin=CNBR_ACIDO species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
chromosome segregation protein SMC
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_0919_05_20cm_scaffold_4729_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

16433..17236
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9N5_ACIC5
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_0919_05_20cm_scaffold_4729_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

17233..17763
DNA (531bp) protein (177aa)
Ste24 endopeptidase (EC:3.4.24.84)
STE24 endopeptidase id=1795638 bin=GWD2_RBX1-related_39_127 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_0919_05_20cm_scaffold_4729_13
unknown

Not on your lists

comp(17760..18206)
DNA (447bp) protein (149aa)

This feature has no annotations

14_0919_05_20cm_scaffold_4729_14
unknown

Not on your lists

comp(18256..18531)
DNA (276bp) protein (92aa)

This feature has no annotations

14_0919_05_20cm_scaffold_4729_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

18594..19184
DNA (591bp) protein (197aa)
UbiX related subunit of putative (De) carboxylase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NWG7_AROAE
ubiX_R; UbiX related subunit of putative (de) carboxylase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
14_0919_05_20cm_scaffold_4729_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(19262..21373)
DNA (2112bp) protein (704aa)
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] id=12555521 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
polynucleotide phosphorylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_0919_05_20cm_scaffold_4729_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


comp(21420..21689)
DNA (270bp) protein (90aa)
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 id=12555520 bin=CNBR_ACIDO species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsO; 30S ribosomal protein S15
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_0919_05_20cm_scaffold_4729_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(21847..22734)
DNA (888bp) protein (296aa)
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9R1U1_9DELT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_0919_05_20cm_scaffold_4729_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(23304..24152)
DNA (849bp) protein (283aa)
Exopolyphosphatase-related protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFH6_CHLTF
exopolyphosphatase-like protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_0919_05_20cm_scaffold_4729_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(24250..24639)
DNA (390bp) protein (130aa)
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A id=12555517 bin=CNBR_ACIDO species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rbfA; ribosome-binding factor A
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_0919_05_20cm_scaffold_4729_21
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(24727..25146)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W30_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
14_0919_05_20cm_scaffold_4729_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(25212..28082)
DNA (2871bp) protein (957aa)
translation initiation factor 2; K02519 translation initiation factor IF-2 id=12555516 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
translation initiation factor 2
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_0919_05_20cm_scaffold_4729_23
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(28086..29525)
DNA (1440bp) protein (480aa)
NusA antitermination factor; K02600 N utilization substance protein A id=12555515 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
NusA antitermination factor
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_0919_05_20cm_scaffold_4729_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(29533..29982)
DNA (450bp) protein (150aa)
hypothetical protein; K09748 ribosome maturation factor RimP id=12555514 bin=CNBR_ACIDO species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_0919_05_20cm_scaffold_4729_25
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(30078..31436)
DNA (1359bp) protein (453aa)
30S ribosomal protein S12P methylthiotransferase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] id=12555513 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
30S ribosomal protein S12P methylthiotransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_0919_05_20cm_scaffold_4729_26
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(31477..32769)
DNA (1293bp) protein (431aa)
asparaginyl-tRNA synthetase (EC:6.1.1.22); K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] id=12555512 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_0919_05_20cm_scaffold_4729_27
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(32816..33532)
DNA (717bp) protein (239aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_0919_05_20cm_scaffold_4729_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(33561..34631)
DNA (1071bp) protein (357aa)
aminoglycoside phosphotransferase id=12555511 bin=CNBR_ACIDO species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
aminoglycoside phosphotransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_0919_05_20cm_scaffold_4729_29
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(34719..35540)
DNA (822bp) protein (274aa)
nucleotidyl transferase id=12555510 bin=CNBR_ACIDO species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
mannose-1-phosphate guanyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_0919_05_20cm_scaffold_4729_30
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(35644..36198)
DNA (555bp) protein (185aa)
cyaB; adenylate cyclase; K05873 adenylate cyclase, class 2 [EC:4.6.1.1] id=12555509 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
adenylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying items 1-30 of 31 in total

View Taxonomy