ggKbase home page

14_0927_09_40cm_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 299 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0927_09_40cm_scaffold_1_1
unknown

Not on your lists

3..833
DNA (831bp) protein (277aa)

This feature has no annotations

14_0927_09_40cm_scaffold_1_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

905..1768
DNA (864bp) protein (288aa)
Prephenate dehydrogenase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZMW9_OPITP
prephenate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0927_09_40cm_scaffold_1_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1825..3078
DNA (1254bp) protein (418aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YVM9_9CLOT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0927_09_40cm_scaffold_1_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3087..3800
DNA (714bp) protein (238aa)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A407_GEMAT
Cytidylate kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0927_09_40cm_scaffold_1_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


3885..5594
DNA (1710bp) protein (570aa)
30S ribosomal protein S1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A406_GEMAT
RNA binding S1 domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0927_09_40cm_scaffold_1_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5705..7228
DNA (1524bp) protein (508aa)
Acyl-CoA carboxylase beta chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A400_GEMAT
carboxyl transferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0927_09_40cm_scaffold_1_7
unknown

Not on your lists

7209..8168
DNA (960bp) protein (320aa)

This feature has no annotations

14_0927_09_40cm_scaffold_1_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8170..9687
DNA (1518bp) protein (506aa)
acyl-CoA carboxylase alpha chain (EC:6.4.1.-) rbh
Acyl-CoA carboxylase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z9_GEMAT rbh
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0927_09_40cm_scaffold_1_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

9684..10925
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z8_GEMAT
(Uracil-5)-methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0927_09_40cm_scaffold_1_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10922..11440
DNA (519bp) protein (173aa)
Biotin carboxyl carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z7_GEMAT
biotin carboxyl carrier protein
Biotin carboxyl carrier protein {ECO:0000313|EMBL:BAH38822.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_0927_09_40cm_scaffold_1_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


11506..11949
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL13_GEMAT
rplM; 50S ribosomal protein L13
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0927_09_40cm_scaffold_1_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists


11946..12353
DNA (408bp) protein (136aa)
30S ribosomal protein S9 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS9_GEMAT
rpsI; 30S ribosomal protein S9
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0927_09_40cm_scaffold_1_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


12555..13436
DNA (882bp) protein (294aa)
30S ribosomal protein S2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z3_GEMAT
ribosomal protein S2
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0927_09_40cm_scaffold_1_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

13527..14135
DNA (609bp) protein (203aa)
elongation factor Ts n=1 Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B61283
tsf; elongation factor Ts
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0927_09_40cm_scaffold_1_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14136..14870
DNA (735bp) protein (245aa)
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z1_GEMAT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0927_09_40cm_scaffold_1_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14867..15433
DNA (567bp) protein (189aa)
Ribosome-recycling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z0_GEMAT
Ribosome-recycling factor
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0927_09_40cm_scaffold_1_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15435..16175
DNA (741bp) protein (247aa)
Isoprenyl transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y9_GEMAT
Undecaprenyl pyrophosphate synthase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0927_09_40cm_scaffold_1_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16175..17026
DNA (852bp) protein (284aa)
Phosphatidate cytidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y8_GEMAT
phosphatidate cytidylyltransferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0927_09_40cm_scaffold_1_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17023..18156
DNA (1134bp) protein (378aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y7_GEMAT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0927_09_40cm_scaffold_1_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18147..19508
DNA (1362bp) protein (454aa)
Membrane-associated zinc metalloprotease n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DZ31_THIND
yaeL_[C]; Membrane-associated zinc metalloprotease
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0927_09_40cm_scaffold_1_21
unknown

Not on your lists

19483..19893
DNA (411bp) protein (137aa)

This feature has no annotations

14_0927_09_40cm_scaffold_1_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19885..20781)
DNA (897bp) protein (299aa)
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y3_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0927_09_40cm_scaffold_1_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


20850..21107
DNA (258bp) protein (86aa)
30S ribosomal protein S15 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y2_GEMAT
rpsO; 30S ribosomal protein S15
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0927_09_40cm_scaffold_1_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21186..23285
DNA (2100bp) protein (700aa)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PNP_GEMAT rbh
Polyribonucleotide nucleotidyltransferase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0927_09_40cm_scaffold_1_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23285..24556
DNA (1272bp) protein (424aa)
Putative S16B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y0_GEMAT
peptidase M16 domain protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0927_09_40cm_scaffold_1_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24574..25686
DNA (1113bp) protein (371aa)
Alanine dehydrogenase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SHM4_GALCS rbh
alanine dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0927_09_40cm_scaffold_1_27
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25683..26126
DNA (444bp) protein (148aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. (strain FO-BEG1).;"
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FFE778
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
14_0927_09_40cm_scaffold_1_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26510..27526
DNA (1017bp) protein (339aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N9_GEMAT
protein kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0927_09_40cm_scaffold_1_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(28085..28987)
DNA (903bp) protein (301aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADQ6_GEMAT
enoyl-(acyl carrier protein) reductase
Enoyl-(Acyl carrier protein) reductase {ECO:0000313|EMBL:AHG89206.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0927_09_40cm_scaffold_1_30
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(29076..30251)
DNA (1176bp) protein (392aa)
ial:IALB_0329 Dehydrogenase flavoprotein id=718002 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
geranylgeranyl reductase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Displaying items 1-30 of 299 in total

View Taxonomy