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14_0927_09_40cm_scaffold_3342

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0927_09_40cm_scaffold_3342_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1..330)
DNA (330bp) protein (110aa)
Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB63_9BACT
Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein {ECO:0000313|EMBL:EDY16341.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA repair nucleotidyltransferase/DNA polymerase-like protein
14_0927_09_40cm_scaffold_3342_2
uncultured Verrucomicrobia bacterium, Verrucomicrobia, Bacteria

Not on your lists

comp(330..1013)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=uncultured Verrucomicrobia bacterium RepID=D2DXS1_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACO70894.1}; TaxID=156588 species="Bacteria; Verrucomicrobia; environmental samples.;" source="uncultured Verrucomicrobia bacterium.;"
hypothetical protein
14_0927_09_40cm_scaffold_3342_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1135..1749)
DNA (615bp) protein (205aa)
LexA repressor {ECO:0000256|RuleBase:RU003992, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.- {ECO:0000256|SAAS:SAAS00273293};; EC=3.4.21.88 {ECO:0000256|RuleBase:RU003992, ECO:0000256|SAAS:SAAS00008054};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
heme-binding protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744342
LexA family transcriptional repressor
14_0927_09_40cm_scaffold_3342_4
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(1808..5200)
DNA (3393bp) protein (1131aa)
protease id=8267303 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes) rbh
peptidase S41
Tax=RBG_16_Aminicenantes_63_16_curated
14_0927_09_40cm_scaffold_3342_5
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(5282..6103)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYE8_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77046.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
14_0927_09_40cm_scaffold_3342_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6103..7482)
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000371EEE6
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AHG88649.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0927_09_40cm_scaffold_3342_7
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7694..8515)
DNA (822bp) protein (274aa)
hypothetical protein SCB02_01843 id=4225764 bin=GWF2_Ignavibacteria_35_20 species=Synechococcus sp. CB0205 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
14_0927_09_40cm_scaffold_3342_8
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8707..10104)
DNA (1398bp) protein (466aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Uncharacterized protein n=3 Tax=Enterococcus malodoratus ATCC 43197 RepID=S0N0F8_9ENTE
ATP-dependent RNA helicase
14_0927_09_40cm_scaffold_3342_9
Strigamia maritima, Strigamia, Geophilomorpha, Pleurostigmophora, Arthropoda, Metazoa

Not on your lists

comp(10299..11501)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Strigamia maritima RepID=T1J8Q6_STRMM
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SMAR010092-PA}; TaxID=126957 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Myriapoda; Chilopoda; Pleurostigmophora; Geophilomorpha; Linotaeniidae; Strigamia.;" source="Strigamia maritima (European centipede) (Geophilus maritimus).;"
14_0927_09_40cm_scaffold_3342_10
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(11570..11965)
DNA (396bp) protein (132aa)
acetyltransferase n=1 Tax=Paenibacillus sp. JC66 RepID=UPI00028937BD
GCN5 family acetyltransferase
Tax=BJP_08E140C01_Anaerolineales_40_8
14_0927_09_40cm_scaffold_3342_11
unknown

Not on your lists

12029..12226
DNA (198bp) protein (66aa)

This feature has no annotations

14_0927_09_40cm_scaffold_3342_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

12300..12683
DNA (384bp) protein (128aa)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:EDY20002.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EDY20002.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PAS/PAC Sensor Hybrid Histidine Kinase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174467C
PAS domain-containing protein
14_0927_09_40cm_scaffold_3342_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13002..13277)
DNA (276bp) protein (92aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA-directed RNA polymerase subunit omega n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCN8_9BACT
DNA-directed RNA polymerase subunit omega
14_0927_09_40cm_scaffold_3342_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13524..14177)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAS6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16486.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
14_0927_09_40cm_scaffold_3342_15

Not on your lists

comp(14399..14632)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0D9_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49182.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
14_0927_09_40cm_scaffold_3342_16
unknown

Not on your lists

comp(14787..14966)
DNA (180bp) protein (60aa)

This feature has no annotations

14_0927_09_40cm_scaffold_3342_17

Not on your lists

comp(14995..15399)
DNA (405bp) protein (135aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48375.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
14_0927_09_40cm_scaffold_3342_18
unknown

Not on your lists

comp(15683..16237)
DNA (555bp) protein (185aa)

This feature has no annotations

14_0927_09_40cm_scaffold_3342_19
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16366..17421)
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1T1_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78675.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying 19 items

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