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14_0927_09_40cm_scaffold_4161

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0927_09_40cm_scaffold_4161_1
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..1984)
DNA (1983bp) protein (661aa)
Secreted protein containing hyalin domain id=4245712 bin=GWF2_Bacteroidetes_38_335 species=Gramella forsetii genus=Gramella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=GWA2_Bacteroidetes_40_15_curated
14_0927_09_40cm_scaffold_4161_2
unknown

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2390..3403
DNA (1014bp) protein (338aa)

This feature has no annotations

14_0927_09_40cm_scaffold_4161_3
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

3412..4326
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017463A6
iron dicitrate transport regulator FecR
Iron dicitrate transport regulator FecR {ECO:0000313|EMBL:AHF93350.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
14_0927_09_40cm_scaffold_4161_4
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4330..7074
DNA (2745bp) protein (915aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017463A6
FecR protein {ECO:0000313|EMBL:EKV01943.1}; Flags: Precursor;; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
hypothetical protein
14_0927_09_40cm_scaffold_4161_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7114..7809)
DNA (696bp) protein (232aa)
Peptidoglycan-binding LysM n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3Y6_9BACT
Peptidoglycan-binding LysM {ECO:0000313|EMBL:EDY18966.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
peptidoglycan-binding lysin domain-containing protein
14_0927_09_40cm_scaffold_4161_6
unknown

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7864..8400
DNA (537bp) protein (179aa)

This feature has no annotations

14_0927_09_40cm_scaffold_4161_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(8397..9515)
DNA (1119bp) protein (373aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D365_9BACT
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:EDY19176.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
UBA/THIF-type NAD/FAD binding protein
14_0927_09_40cm_scaffold_4161_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9515..9859)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNM6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58566.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
14_0927_09_40cm_scaffold_4161_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(10246..10455)
DNA (210bp) protein (70aa)
50S ribosomal protein L35 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIW8_9BACT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rpmI; ribosomal protein L35
14_0927_09_40cm_scaffold_4161_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10689..11969
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Bdellovibrio exovorus JSS RepID=M4V9D8_9DELT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0927_09_40cm_scaffold_4161_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

12050..12502
DNA (453bp) protein (151aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Endoribonuclease YbeY n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP4_9BACT
hypothetical protein
14_0927_09_40cm_scaffold_4161_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

12504..12863
DNA (360bp) protein (120aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP2_9BACT
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ATP-dependent Clp protease adapter protein ClpS
14_0927_09_40cm_scaffold_4161_13
unknown

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12865..13350
DNA (486bp) protein (162aa)

This feature has no annotations

14_0927_09_40cm_scaffold_4161_14
unknown

Not on your lists

comp(13347..13604)
DNA (258bp) protein (86aa)

This feature has no annotations

14_0927_09_40cm_scaffold_4161_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13594..14190)
DNA (597bp) protein (199aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D199_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY19791.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative RNA polymerase sigma factor, sigma-24-like protein
14_0927_09_40cm_scaffold_4161_16
unknown

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14415..15074
DNA (660bp) protein (220aa)

This feature has no annotations

14_0927_09_40cm_scaffold_4161_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15212..16156
DNA (945bp) protein (315aa)
trehalose synthase/maltokinase (EC:5.4.99.16)
Trehalose synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ69_9BACT
Trehalose synthase {ECO:0000313|EMBL:EDY20760.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Displaying 17 items

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