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14_0927_09_40cm_scaffold_8704

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0927_09_40cm_scaffold_8704_1
unknown

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3..110
DNA (108bp) protein (36aa)

This feature has no annotations

14_0927_09_40cm_scaffold_8704_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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137..598
DNA (462bp) protein (154aa)
SsrA-binding protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCN7_9BACT
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SsrA-binding protein
14_0927_09_40cm_scaffold_8704_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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660..1544
DNA (885bp) protein (295aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRS8_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EEF57439.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
short-chain dehydrogenase/reductase SDR
14_0927_09_40cm_scaffold_8704_4
unknown

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comp(1580..1942)
DNA (363bp) protein (121aa)

This feature has no annotations

14_0927_09_40cm_scaffold_8704_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2104..3534)
DNA (1431bp) protein (477aa)
Major facilitator superfamily MFS_1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWD2_9BACT
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EDY21724.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative sugar transport protein
14_0927_09_40cm_scaffold_8704_6
unknown

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comp(3620..3991)
DNA (372bp) protein (124aa)

This feature has no annotations

14_0927_09_40cm_scaffold_8704_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4056..6986)
DNA (2931bp) protein (977aa)
Protein translocase subunit SecA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6C4_9BACT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
secA; preprotein translocase subunit SecA (ATPase, RNA helicase)
14_0927_09_40cm_scaffold_8704_8
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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7122..7292
DNA (171bp) protein (57aa)
Endoribonuclease L-PSP n=1 Tax=Desulfovibrio sp. X2 RepID=S7TT78_9DELT
Endoribonuclease L-PSP {ECO:0000313|EMBL:EPR40226.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
endoribonuclease L-PSP
14_0927_09_40cm_scaffold_8704_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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7612..8178
DNA (567bp) protein (189aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CY80_9BACT
14_0927_09_40cm_scaffold_8704_10
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

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8280..8930
DNA (651bp) protein (217aa)
Succinate dehydrogenase cytochrome B subunit, b558 family n=12 Tax=Leptospira RepID=J5CX98_9LEPT
sdhC; succinate dehydrogenase cytochrome subunit B
Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
14_0927_09_40cm_scaffold_8704_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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8927..10864
DNA (1938bp) protein (646aa)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:EDY18605.1}; EC=1.3.99.1 {ECO:0000313|EMBL:EDY18605.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D502_9BACT
14_0927_09_40cm_scaffold_8704_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10915..11670
DNA (756bp) protein (252aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4Z9_9BACT
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:EDY18602.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
14_0927_09_40cm_scaffold_8704_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(11763..12599)
DNA (837bp) protein (279aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Y4_9BACT
14_0927_09_40cm_scaffold_8704_14
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

12728..13264
DNA (537bp) protein (179aa)
Orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=445932 species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KCN9_ELUMP
Displaying 14 items

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