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14_0927_12_20cm_scaffold_3117

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0927_12_20cm_scaffold_3117_1
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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1..204
DNA (204bp) protein (68aa)
ThiO:disulfide interchange protein, putative n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVC4_9BACT
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
14_0927_12_20cm_scaffold_3117_2
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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207..809
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PDV5_CELJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE84182.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
14_0927_12_20cm_scaffold_3117_3
unknown

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1130..1582
DNA (453bp) protein (151aa)

This feature has no annotations

14_0927_12_20cm_scaffold_3117_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1628..2422)
DNA (795bp) protein (265aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7N7_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EDY17527.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
short-chain dehydrogenase/reductase SDR
14_0927_12_20cm_scaffold_3117_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(2409..3200)
DNA (792bp) protein (264aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Pseudouridine synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D966_9BACT
pseudouridine synthase
14_0927_12_20cm_scaffold_3117_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3288..3443)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2S4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19035.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
14_0927_12_20cm_scaffold_3117_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3541..5334)
DNA (1794bp) protein (598aa)
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family id=4527525 bin=GWC2_Methylomirabilis_70_16 species=Methylacidiphilum infernorum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
arnT; 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family
Tax=GWC2_Rokubacteria_70_16_curated
14_0927_12_20cm_scaffold_3117_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5336..5767)
DNA (432bp) protein (144aa)
Thioesterase superfamily protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8V8_9BACT
Thioesterase superfamily protein {ECO:0000313|EMBL:EDY17166.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
thioesterase
14_0927_12_20cm_scaffold_3117_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5764..7650)
DNA (1887bp) protein (629aa)
ADP-heptose--LPS heptosyltransferase II (EC:2.-.-.-)
Lipopolysaccharide heptosyltransferase II n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3G7_9BACT
Lipopolysaccharide heptosyltransferase II {ECO:0000313|EMBL:EDY18797.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_0927_12_20cm_scaffold_3117_10

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7711..9435
DNA (1725bp) protein (575aa)
Predicted glycosyltransferases n=1 Tax=Clostridium sp. CAG:299 RepID=R7AAP4_9CLOT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48824.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
glycosyl transferase, group 2 family protein
14_0927_12_20cm_scaffold_3117_11
unknown

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9548..10324
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746A85
14_0927_12_20cm_scaffold_3117_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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10361..11029
DNA (669bp) protein (223aa)
UbiE/COQ5 methyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAK0_9BACT
UbiE/COQ5 methyltransferase {ECO:0000313|EMBL:EDY16518.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
type 11 methyltransferase
14_0927_12_20cm_scaffold_3117_13
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11126..11962
DNA (837bp) protein (279aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094320}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
Pantothenate synthetase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RPW3_9CLOT
pantoate/beta-alanine ligase
14_0927_12_20cm_scaffold_3117_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11959..13554
DNA (1596bp) protein (532aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
L-aspartate oxidase (EC:1.4.3.16) rbh
L-aspartate oxidase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAI6_9BACT rbh
14_0927_12_20cm_scaffold_3117_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13564..14496
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAI5_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY16503.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
14_0927_12_20cm_scaffold_3117_16
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(14493..16226)
DNA (1734bp) protein (578aa)
GTPase dynamin-related protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746323
Dynamin family protein {ECO:0000313|EMBL:EFO78983.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
Dynamin family protein
14_0927_12_20cm_scaffold_3117_17
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(16237..17043)
DNA (807bp) protein (269aa)
Polysaccharide deacetylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS3_9BACT
polysaccharide deacetylase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0927_12_20cm_scaffold_3117_18
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17256..19160
DNA (1905bp) protein (635aa)
PAS domain S-box n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C129_DESTA
PAS domain S-box
PAS domain S-box {ECO:0000313|EMBL:AFM23270.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
14_0927_12_20cm_scaffold_3117_19
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(19157..19375)
DNA (219bp) protein (73aa)
Thiol-disulfide isomerase or thioredoxin n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DYD6_METI4
trxA; Thiol-disulfide isomerase or thioredoxin
Thiol-disulfide isomerase or thioredoxin {ECO:0000313|EMBL:ACD82413.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
Displaying 19 items

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