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14_0927_12_20cm_scaffold_5536

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0927_12_20cm_scaffold_5536_1
RHI_OP11_Roizmanbacteria_44_10, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(479..751)
DNA (273bp) protein (91aa)
CopG family transcriptional regulator n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003812A55
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_44_10_curated
14_0927_12_20cm_scaffold_5536_2
unknown

Not on your lists

867..971
DNA (105bp) protein (35aa)

This feature has no annotations

14_0927_12_20cm_scaffold_5536_3
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1211..1471)
DNA (261bp) protein (87aa)
Addiction module toxin, Txe/YoeB family n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UFQ2_9CYAN
Toxin of toxin-antitoxin system {ECO:0000313|EMBL:KIF39713.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
addiction module antitoxin
14_0927_12_20cm_scaffold_5536_4
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1468..1710)
DNA (243bp) protein (81aa)
Prevent-host-death family protein id=4917918 bin=GWA2_Elusimicrobia_66_18 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Prevent-host-death family protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
14_0927_12_20cm_scaffold_5536_5
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(2529..3200)
DNA (672bp) protein (224aa)
Oxidoreductase molybdopterin binding n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZR05_OPITP rbh
molybdopterin binding oxidoreductase rbh
Oxidoreductase molybdopterin binding {ECO:0000313|EMBL:ACB73672.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
14_0927_12_20cm_scaffold_5536_6

Not on your lists

comp(3373..4134)
DNA (762bp) protein (254aa)
UvrB/UvrC protein n=1 Tax=uncultured bacterium RepID=F8UVP9_9BACT
UvrB/UvrC protein {ECO:0000313|EMBL:AEI30167.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
14_0927_12_20cm_scaffold_5536_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

4222..5112
DNA (891bp) protein (297aa)
Tyrosine recombinase XerC n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D116_9BACT
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
integrase
14_0927_12_20cm_scaffold_5536_8
unknown

Not on your lists

5179..5730
DNA (552bp) protein (184aa)

This feature has no annotations

14_0927_12_20cm_scaffold_5536_9
unknown

Not on your lists

5679..7103
DNA (1425bp) protein (475aa)

This feature has no annotations

14_0927_12_20cm_scaffold_5536_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7293..7493
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6N4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17835.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_0927_12_20cm_scaffold_5536_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7517..7888
DNA (372bp) protein (124aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NADH-quinone oxidoreductase subunit I n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017456B9
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
14_0927_12_20cm_scaffold_5536_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8002..8319
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6N6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17837.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
14_0927_12_20cm_scaffold_5536_13

Not on your lists

8378..9616
DNA (1239bp) protein (413aa)
Glycosyl transferase, group 1 n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174595C
Glycosyl transferases group 1 {ECO:0000313|EMBL:AIA11190.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
group 1 glycosyl transferase
14_0927_12_20cm_scaffold_5536_14
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9799..10665
DNA (867bp) protein (289aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WMH1_GEOS8
glucose-1-phosphate thymidylyltransferase
14_0927_12_20cm_scaffold_5536_15
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(10777..11250)
DNA (474bp) protein (158aa)
Putative uncharacterized protein id=2910773 bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
Tax=GWF2_Lentisphaerae_57_35_curated
14_0927_12_20cm_scaffold_5536_16
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11416..12069)
DNA (654bp) protein (218aa)
SCO1/SenC family protein id=1947439 bin=GWD2_Deltaproteobacteria_55_8 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
electron transport protein SCO1/SenC
Tax=GWD2_Deltaproteobacteria_55_8_curated
14_0927_12_20cm_scaffold_5536_17
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12066..12980)
DNA (915bp) protein (305aa)
Protoheme IX farnesyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XST7_9BACT
protoheme IX farnesyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0927_12_20cm_scaffold_5536_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12977..14008)
DNA (1032bp) protein (344aa)
Cytochrome oxidase assembly n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XST6_9BACT
Cytochrome oxidase assembly {ECO:0000313|EMBL:EEF57103.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ctaA; Heme A synthase, cytochrome oxidase biogenesis protein CtaA
14_0927_12_20cm_scaffold_5536_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(14236..15156)
DNA (921bp) protein (307aa)
Cytochrome c oxidase subunit II n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZZ7_9BACT
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:EDY20311.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cyoA; Heme/copper-type cytochrome oxidase, subunit 2
14_0927_12_20cm_scaffold_5536_20
unknown

Not on your lists

comp(15149..15421)
DNA (273bp) protein (91aa)

This feature has no annotations

14_0927_12_20cm_scaffold_5536_21
unknown

Not on your lists

comp(15418..15627)
DNA (210bp) protein (70aa)

This feature has no annotations

14_0927_12_20cm_scaffold_5536_22
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(15627..15968)
DNA (342bp) protein (114aa)
caa(3)-type oxidase, subunit IV n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B68729
caa(3)-type oxidase subunit IV
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
14_0927_12_20cm_scaffold_5536_23
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(15971..16171)
DNA (201bp) protein (67aa)
heme transporter CcmC n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000377BD7D
cyoC; Heme/copper-type cytochrome oxidase, subunit 3
Heme/copper-type cytochrome oxidase, subunit 3 {ECO:0000313|EMBL:ACD84004.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
Displaying 23 items

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