ggKbase home page

14_0927_12_40cm_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 58 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0927_12_40cm_scaffold_106_1

Not on your lists

comp(2..118)
DNA (117bp) protein (39aa)
Putative transposase n=1 Tax=uncultured bacterium RM57 RepID=C8XT97_9BACT
Putative transposase {ECO:0000313|EMBL:ACI04490.1}; TaxID=561246 species="Bacteria; environmental samples.;" source="uncultured bacterium RM57.;"
14_0927_12_40cm_scaffold_106_2
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(475..903)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000372ADC4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV83763.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
14_0927_12_40cm_scaffold_106_3
unknown

Not on your lists

1453..2376
DNA (924bp) protein (308aa)

This feature has no annotations

14_0927_12_40cm_scaffold_106_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2486..2908)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037A80CA
nucleic acid binding protein
Nucleic acid-binding protein contains PIN domain-like protein {ECO:0000313|EMBL:ABJ81895.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0927_12_40cm_scaffold_106_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2943..3266)
DNA (324bp) protein (108aa)
Prevent-host-death family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AM0_SOLUE
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ABJ81896.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0927_12_40cm_scaffold_106_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3309..4022)
DNA (714bp) protein (238aa)
HNH endonuclease n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE61_ALIDK
HNH endonuclease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
14_0927_12_40cm_scaffold_106_7
unknown

Not on your lists

4289..4441
DNA (153bp) protein (51aa)

This feature has no annotations

14_0927_12_40cm_scaffold_106_8
unknown

Not on your lists

4520..4774
DNA (255bp) protein (85aa)

This feature has no annotations

14_0927_12_40cm_scaffold_106_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

4779..5879
DNA (1101bp) protein (367aa)
tRNA-dihydrouridine synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RW9_SOLUE
nifR3 family TIM-barrel protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_40cm_scaffold_106_10
unknown

Not on your lists

5833..6195
DNA (363bp) protein (121aa)

This feature has no annotations

14_0927_12_40cm_scaffold_106_11
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6229..7488)
DNA (1260bp) protein (420aa)
Bicupin, oxalate decarboxylase family {ECO:0000313|EMBL:AEU36858.1}; EC=4.1.1.2 {ECO:0000313|EMBL:AEU36858.1};; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
cupin n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B3A986 rbh
oxalate decarboxylase family bicupin rbh
14_0927_12_40cm_scaffold_106_12
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7791..8783)
DNA (993bp) protein (331aa)
Transposase n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M9Y4_9BACL
Transposase {ECO:0000313|EMBL:EST54690.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
IS493 family transposase
14_0927_12_40cm_scaffold_106_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8776..9393)
DNA (618bp) protein (206aa)
Sigma-24, ECF subfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILW7_KORVE
ECF subfamily RNA polymerase sigma-24 factor
Sigma-24, ECF subfamily {ECO:0000313|EMBL:ABF42133.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_0927_12_40cm_scaffold_106_14
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

10037..12244
DNA (2208bp) protein (736aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGU6_THET1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ42967.1}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
14_0927_12_40cm_scaffold_106_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12484..13323
DNA (840bp) protein (280aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Pyrroline-5-carboxylate reductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM0_KORVE
pyrroline-5-carboxylate reductase
14_0927_12_40cm_scaffold_106_16
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

13375..13749
DNA (375bp) protein (125aa)
NADH-quinone oxidoreductase subunit A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020T7_SOLUE
NADH-ubiquinone/plastoquinone oxidoreductase subunit 3
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
14_0927_12_40cm_scaffold_106_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

13941..14618
DNA (678bp) protein (226aa)
NADH-quinone oxidoreductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS60_KORVE
NADH (or F420H2) dehydrogenase subunit C
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_40cm_scaffold_106_18
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

14579..15766
DNA (1188bp) protein (396aa)
NADH-quinone oxidoreductase subunit D 1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=NUOD1_KORVE
NADH dehydrogenase I subunit D
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
14_0927_12_40cm_scaffold_106_19
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

15815..17188
DNA (1374bp) protein (458aa)
NADH-quinone oxidoreductase subunit H 2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=NUOH2_SOLUE
respiratory-chain NADH dehydrogenase subunit 1
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
14_0927_12_40cm_scaffold_106_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

17178..17696
DNA (519bp) protein (173aa)
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UN7_SOLUE
NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 {ECO:0000313|EMBL:ABJ86633.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0927_12_40cm_scaffold_106_21
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

17703..18005
DNA (303bp) protein (101aa)
NADH-quinone oxidoreductase subunit K 1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=NUOK1_KORVE
NADH-ubiquinone oxidoreductase, chain 4L
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
14_0927_12_40cm_scaffold_106_22
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

18045..20258
DNA (2214bp) protein (738aa)
NADH dehydrogenase subunit L n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS54_KORVE
proton-translocating NADH-quinone oxidoreductase subunit L
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
14_0927_12_40cm_scaffold_106_23
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

20269..21846
DNA (1578bp) protein (526aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UN4_SOLUE
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
14_0927_12_40cm_scaffold_106_24
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

21856..23400
DNA (1545bp) protein (515aa)
proton-translocating NADH-quinone oxidoreductase subunit N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N 2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=NUON2_SOLUE
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_40cm_scaffold_106_25
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

23649..24080
DNA (432bp) protein (144aa)
Bacterial ATP synthase I n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFQ1_CHLTF
ATP synthase I
Bacterial ATP synthase I {ECO:0000313|EMBL:AEP11695.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
14_0927_12_40cm_scaffold_106_26
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

24111..24929
DNA (819bp) protein (273aa)
ATP synthase subunit a n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P006_GRAMM
ATP synthase F0 subunit A
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_40cm_scaffold_106_27
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

25036..25350
DNA (315bp) protein (105aa)
ATPase n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036233AC
H+transporting two-sector ATPase subunit C
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
14_0927_12_40cm_scaffold_106_28
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(25719..27182)
DNA (1464bp) protein (488aa)
NADH-quinone oxidoreductase subunit N 2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=NUON2_KORVE
proton-translocating NADH-quinone oxidoreductase, chain N
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_40cm_scaffold_106_29
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(27182..28774)
DNA (1593bp) protein (531aa)
NADH dehydrogenase subunit M n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS44_KORVE
proton-translocating NADH-quinone oxidoreductase subunit M
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
14_0927_12_40cm_scaffold_106_30
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(28774..30798)
DNA (2025bp) protein (675aa)
NADH dehydrogenase subunit L {ECO:0000313|EMBL:ABF40307.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABF40307.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
NADH dehydrogenase subunit L n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS43_KORVE
proton-translocating NADH-quinone oxidoreductase subunit L
Displaying items 1-30 of 58 in total

View Taxonomy