ggKbase home page

14_0927_12_40cm_scaffold_262

Search features with annotation key words

Displaying items 1-30 of 32 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0927_12_40cm_scaffold_262_1
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

64..1011
DNA (948bp) protein (316aa)
carbohydrate kinase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B704FA
sugar kinase rbh
Sugar kinase, ribokinase {ECO:0000313|EMBL:AFL87398.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
14_0927_12_40cm_scaffold_262_2
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

1559..2746
DNA (1188bp) protein (396aa)
DNA methylase N-4/N-6 domain-containing protein id=15193284 bin=GWC2_NOV_55_46 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria rbh
DNA methylase N-4
Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
14_0927_12_40cm_scaffold_262_3
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

2889..4430
DNA (1542bp) protein (514aa)
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
14_0927_12_40cm_scaffold_262_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4505..5116
DNA (612bp) protein (204aa)
restriction endonuclease BglII n=1 Tax=unclassified Aminicenantes RepID=UPI0003772C4C
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0927_12_40cm_scaffold_262_5
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists

5171..6148
DNA (978bp) protein (326aa)
Modification methylase BglII id=4734848 bin=GWA2_Methylomirabilis_73_35 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
DNA methylase N-4/N-6 domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
14_0927_12_40cm_scaffold_262_6
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

6171..6938
DNA (768bp) protein (256aa)
Dam-replacing family id=3728807 bin=GWF2_Nitrospirae_44_13 species=Eubacterium rectale genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
restriction endonuclease family protein
Tax=GWF2_Nitrospirae_44_13_curated
14_0927_12_40cm_scaffold_262_7
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6935..7252)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036C2AB1
XRE family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
14_0927_12_40cm_scaffold_262_8
unknown

Not on your lists

comp(8155..8466)
DNA (312bp) protein (104aa)

This feature has no annotations

14_0927_12_40cm_scaffold_262_9
unknown

Not on your lists

9056..9751
DNA (696bp) protein (232aa)

This feature has no annotations

14_0927_12_40cm_scaffold_262_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10163..11821
DNA (1659bp) protein (553aa)
Tetratricopeptide repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITM7_KORVE
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ABF39773.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_0927_12_40cm_scaffold_262_11
unknown

Not on your lists

11935..12273
DNA (339bp) protein (113aa)

This feature has no annotations

14_0927_12_40cm_scaffold_262_12
unknown

Not on your lists

12461..12919
DNA (459bp) protein (153aa)

This feature has no annotations

14_0927_12_40cm_scaffold_262_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(13078..13692)
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025A1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83425.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0927_12_40cm_scaffold_262_14
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(14006..15055)
DNA (1050bp) protein (350aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
14_0927_12_40cm_scaffold_262_15
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(15184..16833)
DNA (1650bp) protein (550aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000361A470
OmpA/MotB domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
14_0927_12_40cm_scaffold_262_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(17148..18449)
DNA (1302bp) protein (434aa)
Thiol oxidoreductase-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024U2_SOLUE
thiol oxidoreductase-like protein
Thiol oxidoreductase-like protein {ECO:0000313|EMBL:ABJ83484.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0927_12_40cm_scaffold_262_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(18560..23164)
DNA (4605bp) protein (1535aa)
DNA helicase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U8K3_9CHLR
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
14_0927_12_40cm_scaffold_262_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

23734..24882
DNA (1149bp) protein (383aa)
Sel1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJP6_KORVE
hypothetical protein
Sel1 {ECO:0000313|EMBL:ABF42904.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_0927_12_40cm_scaffold_262_19
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(24981..27137)
DNA (2157bp) protein (719aa)
Sigma-54 dependent transcriptional regulator (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIU6_9BACT
sigma-54 dependent transcriptional regulator
Sigma-54 dependent transcriptional regulator (Modular protein) {ECO:0000313|EMBL:CBK43183.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
14_0927_12_40cm_scaffold_262_20
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(27274..28242)
DNA (969bp) protein (323aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHW7_KORVE
peptidylprolyl isomerase, FKBP-type
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
14_0927_12_40cm_scaffold_262_21
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28685..29146
DNA (462bp) protein (154aa)
Putative integral membrane protein n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I2P3_MYCRH
Putative integral membrane protein {ECO:0000313|EMBL:EHB53491.1}; Flags: Precursor;; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
hypothetical protein
14_0927_12_40cm_scaffold_262_22
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

29271..30164
DNA (894bp) protein (298aa)
Alkyl hydroperoxide reductase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A001_MELRP
alkyl hydroperoxide reductase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
14_0927_12_40cm_scaffold_262_23
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

30327..30797
DNA (471bp) protein (157aa)
Putative translation initiation inhibitor, yjgf family n=1 Tax=uncultured Acidobacteriales bacterium HF0200_23L05 RepID=E0XUK2_9BACT
endoribonuclease L-PSP
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
14_0927_12_40cm_scaffold_262_24
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

31009..32685
DNA (1677bp) protein (559aa)
Outer membrane efflux protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NG6_SOLUE
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABJ88804.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0927_12_40cm_scaffold_262_25
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

32699..33997
DNA (1299bp) protein (433aa)
Secretion protein HlyD family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NG8_SOLUE
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:ABJ88802.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0927_12_40cm_scaffold_262_26
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

34065..35651
DNA (1587bp) protein (529aa)
Drug resistance transporter, EmrB/QacA subfamily id=3901406 bin=GWF2_Planctomycetes_50_10 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
EmrB/QacA family drug resistance transporter
Tax=GWF2_Planctomycetes_50_10_curated
14_0927_12_40cm_scaffold_262_27
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

35712..36365
DNA (654bp) protein (218aa)
RNA polymerase sigma factor n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V1R1_TERSS
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
14_0927_12_40cm_scaffold_262_28
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(36469..37320)
DNA (852bp) protein (284aa)
Prephenate dehydratase {ECO:0000313|EMBL:CDM65582.1}; EC=4.2.1.51 {ECO:0000313|EMBL:CDM65582.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Prephenate dehydratase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1K7_ACIC5
prephenate dehydratase
14_0927_12_40cm_scaffold_262_29
Bacillus bataviensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

37464..37991
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6DN59_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EKN69769.1}; TaxID=1117379 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus bataviensis LMG 21833.;"
hypothetical protein
14_0927_12_40cm_scaffold_262_30
unknown

Not on your lists

comp(38013..38423)
DNA (411bp) protein (137aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

View Taxonomy