ggKbase home page

14_0929_02_40cm_scaffold_2857

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_02_40cm_scaffold_2857_1
Lysinibacillus boronitolerans, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1..243
DNA (243bp) protein (81aa)
Uncharacterized protein n=3 Tax=Bacillaceae RepID=A3I9I7_9BACI
HxlR family transcriptional regulator {ECO:0000313|EMBL:KGR82308.1}; TaxID=1294264 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus boronitolerans JCM 21713 = 10a = NBRC 103108.;"
transcriptional regulator
14_0929_02_40cm_scaffold_2857_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

240..1217
DNA (978bp) protein (326aa)
Transcription initiation factor IIB n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z1W7_METPS
tfb; transcription initiation factor IIB
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_02_40cm_scaffold_2857_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1214..1510
DNA (297bp) protein (99aa)
Protein translation factor SUI1 homolog n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KXJ2_METBM
translation initiation factor SUI1
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_02_40cm_scaffold_2857_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

1615..2598
DNA (984bp) protein (328aa)
Alcohol dehydrogenase n=1 Tax=uncultured prokaryote RepID=H5SL74_9ZZZZ
alcohol dehydrogenase
Tax=RBG_16_Euryarchaeota_68_12_curated
14_0929_02_40cm_scaffold_2857_5
unknown

Not on your lists

2703..3086
DNA (384bp) protein (128aa)

This feature has no annotations

14_0929_02_40cm_scaffold_2857_6
unknown

Not on your lists

comp(3196..3447)
DNA (252bp) protein (84aa)

This feature has no annotations

14_0929_02_40cm_scaffold_2857_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

3536..4297
DNA (762bp) protein (254aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DEA0_HALXS
Bacterio-opsin activator HTH domain-containing protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_02_40cm_scaffold_2857_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4299..4742)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS38_KORVE
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_02_40cm_scaffold_2857_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4796..5728)
DNA (933bp) protein (311aa)
Thioredoxin reductase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBG9_THET1
thioredoxin reductase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_02_40cm_scaffold_2857_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5815..7038
DNA (1224bp) protein (408aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_02_40cm_scaffold_2857_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(7070..7699)
DNA (630bp) protein (210aa)
flavin reductase domain-containing FMN-binding protein id=24533226 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Paenisporosarcina sp. TG20 genus=Paenisporosarcina taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
flavin reductase domain-containing FMN-binding protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_02_40cm_scaffold_2857_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7798..8187
DNA (390bp) protein (130aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_02_40cm_scaffold_2857_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8117..8914)
DNA (798bp) protein (266aa)
apurinic endonuclease Apn1 (EC:3.1.21.2)
Probable endonuclease 4 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UQY3_ROSS1
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_02_40cm_scaffold_2857_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9081..9803)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML56_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_02_40cm_scaffold_2857_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

9913..11364
DNA (1452bp) protein (484aa)
aldY5; aldehyde dehydrogenase (EC:1.2.1.3)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00037114AE
Tax=RBG_16_Euryarchaeota_68_12_curated
14_0929_02_40cm_scaffold_2857_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11369..11914
DNA (546bp) protein (182aa)
anhydrase n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI00036B3089
SCBAC36F5.26; siderophore binding protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_02_40cm_scaffold_2857_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11911..12360
DNA (450bp) protein (150aa)
Acyl-CoA thioester hydrolase, YbgC/YbaW family n=1 Tax=Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639 RepID=N1VUX7_9LEPT
thioesterase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_02_40cm_scaffold_2857_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(12357..14468)
DNA (2112bp) protein (704aa)
hypothetical protein; K06888 id=14630958 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_02_40cm_scaffold_2857_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(14522..14677)
DNA (156bp) protein (52aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
14_0929_02_40cm_scaffold_2857_20
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(14769..15323)
DNA (555bp) protein (185aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] id=24524921 bin=RBG_19FT_COMBO_GAL15_69_19 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
methionine sulfoxide reductase A (EC:1.8.4.11)
Tax=RBG_16_Euryarchaeota_68_13_curated
14_0929_02_40cm_scaffold_2857_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(15396..16247)
DNA (852bp) protein (284aa)
Amidohydrolase 2 n=1 Tax=mine drainage metagenome RepID=T1BXN0_9ZZZZ
amidohydrolase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_02_40cm_scaffold_2857_22
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(16300..17040)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GIE6_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
14_0929_02_40cm_scaffold_2857_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(17047..17202)
DNA (156bp) protein (52aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 23 items

View Taxonomy