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14_0929_05_30cm_scaffold_471

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Displaying items 1-30 of 58 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_05_30cm_scaffold_471_1
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..210
DNA (210bp) protein (70aa)
Probable monooxygenase protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KNJ4_RHISN
monooxygenase
Probable monooxygenase protein {ECO:0000313|EMBL:ACP21652.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
14_0929_05_30cm_scaffold_471_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(194..1234)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B79E48
hypothetical protein y4wF
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
14_0929_05_30cm_scaffold_471_3
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(1278..1967)
DNA (690bp) protein (230aa)
Putative membrane protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EG64_9CHLR
Putative membrane protein {ECO:0000313|EMBL:CCF83676.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
14_0929_05_30cm_scaffold_471_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2192..2836)
DNA (645bp) protein (215aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII id=4734640 bin=GWA2_Methylomirabilis_73_35 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_30cm_scaffold_471_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(2850..3236)
DNA (387bp) protein (129aa)
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 id=14625202 bin=bin7_NC10_sister species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
50S ribosomal protein L19
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_471_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3284..4033)
DNA (750bp) protein (250aa)
tRNA (Guanine-N1)-methyltransferase id=4734641 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA (guanine-N1)-methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_471_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4046..4585)
DNA (540bp) protein (180aa)
16S rRNA-processing protein RimM id=5019513 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
16S rRNA processing protein RimM
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_05_30cm_scaffold_471_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


comp(4596..4856)
DNA (261bp) protein (87aa)
30S ribosomal protein S16 id=4505275 bin=GWF2_Methylomirabilis_70_14 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsP; 30S ribosomal protein S16
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_05_30cm_scaffold_471_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(4861..6210)
DNA (1350bp) protein (450aa)
Signal recognition particle protein id=3772763 bin=GWC2_Methylomirabilis_70_16 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
signal recognition particle protein rbh
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_471_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6294..6689
DNA (396bp) protein (132aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_0929_05_30cm_scaffold_471_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6710..7015)
DNA (306bp) protein (102aa)
cupin id=24474713 bin=RBG_19FT_COMBO_GAL15_69_19 species=Salinarchaeum sp. Harcht-Bsk1 genus=Salinarchaeum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_471_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7020..7673)
DNA (654bp) protein (218aa)
HAD-superfamily hydrolase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] id=14625197 bin=bin7_NC10_sister species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
rpe; hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_471_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7694..8995)
DNA (1302bp) protein (434aa)
Putative uncharacterized protein id=4505282 bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sun protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_471_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9061..9978)
DNA (918bp) protein (306aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase id=5019509 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_30cm_scaffold_471_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10010..10534)
DNA (525bp) protein (175aa)
peptide deformylase (EC:3.5.1.88)
peptide deformylase id=14625194 bin=bin7_NC10_sister species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_471_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10522..12372)
DNA (1851bp) protein (617aa)
Primosomal protein N' id=3315413 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
primosomal protein N'
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_30cm_scaffold_471_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12548..13246)
DNA (699bp) protein (233aa)
Uncharacterized protein id=3315415 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_471_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13252..14472)
DNA (1221bp) protein (407aa)
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5)
Coenzyme A biosynthesis bifunctional protein CoaBC id=3315417 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_471_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14469..14684)
DNA (216bp) protein (72aa)
DNA-directed RNA polymerase subunit omega id=3315419 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_30cm_scaffold_471_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14684..15298)
DNA (615bp) protein (205aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase id=3315421 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_471_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15291..15575)
DNA (285bp) protein (95aa)
UPF0296 protein GT20_2421 id=3315424 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_471_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15568..16440)
DNA (873bp) protein (291aa)
Putative uncharacterized protein id=3315427 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_471_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16621..16983
DNA (363bp) protein (121aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_471_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16997..21034
DNA (4038bp) protein (1346aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
Multi-sensor signal transduction histidine kinase id=4558717 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_471_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21040..21426
DNA (387bp) protein (129aa)
Transcriptional regulatory protein id=4558721 bin=GWA2_Methylomirabilis_73_35 species=ACD65 genus=ACD65 taxon_order=ACD65 taxon_class=ACD65 phylum=PER tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
response regulator receiver protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_471_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(21522..22091)
DNA (570bp) protein (190aa)
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase id=4815545 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_471_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(22088..22789)
DNA (702bp) protein (234aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase id=4815544 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_30cm_scaffold_471_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22803..26009)
DNA (3207bp) protein (1069aa)
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5) id=14625178 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_471_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26038..26304)
DNA (267bp) protein (89aa)
hypothetical protein id=4530407 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_471_30
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(26313..27437)
DNA (1125bp) protein (375aa)
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain id=4530405 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Tax=GWA2_Rokubacteria_73_35_curated
Displaying items 1-30 of 58 in total

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