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14_0929_05_30cm_scaffold_2037

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_05_30cm_scaffold_2037_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13..423)
DNA (411bp) protein (137aa)
putative lipoprotein id=14625651 bin=bin7_NC10_sister species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_30cm_scaffold_2037_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(483..2066)
DNA (1584bp) protein (528aa)
D-3-phosphoglycerate dehydrogenase id=3870380 bin=GWF2_Methylomirabilis_70_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
D-3-phosphoglycerate dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_2037_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2069..2818)
DNA (750bp) protein (250aa)
2-deoxy-D-gluconate 3-dehydrogenase id=4472645 bin=GWA2_Methylomirabilis_73_35 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
kduD; 2-deoxy-D-gluconate 3-dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_30cm_scaffold_2037_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2837..7210)
DNA (4374bp) protein (1458aa)
dnaE1; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6L4_ACIC5
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_2037_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7214..8692)
DNA (1479bp) protein (493aa)
Putative uncharacterized protein id=4472641 bin=GWA2_Methylomirabilis_73_35 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_2037_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(8680..9237)
DNA (558bp) protein (186aa)
RecA domain protein id=4472640 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
recombinase A
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_2037_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9372..10139
DNA (768bp) protein (256aa)
3-hydroxyacyl-CoA dehydrogenase type II (EC:1.1.1.35)
putative short chain dehydrogenase id=4472638 bin=GWA2_Methylomirabilis_73_35 species=Pseudonocardia sp. P1 genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_30cm_scaffold_2037_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10198..10887
DNA (690bp) protein (230aa)
Spermidine synthase id=4472637 bin=GWA2_Methylomirabilis_73_35 species=Gallaecimonas xiamenensis genus=Gallaecimonas taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_2037_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10957..12630)
DNA (1674bp) protein (558aa)
ABC transporter related protein id=4478788 bin=GWF2_Methylomirabilis_70_14 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_30cm_scaffold_2037_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12689..13132)
DNA (444bp) protein (148aa)
CoA-binding domain protein id=4472625 bin=GWA2_Methylomirabilis_73_35 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
CoA-binding domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_2037_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13149..14306)
DNA (1158bp) protein (386aa)
3'-5' exonuclease id=4472621 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3'-5' exonuclease
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_2037_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14303..14908)
DNA (606bp) protein (202aa)
Short-chain dehydrogenase/reductase SDR id=4472514 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_2037_13
unknown

Not on your lists

comp(14966..15454)
DNA (489bp) protein (163aa)

This feature has no annotations

14_0929_05_30cm_scaffold_2037_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15535..15972
DNA (438bp) protein (146aa)
Endoribonuclease L-PSP id=4472509 bin=GWA2_Methylomirabilis_73_35 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
endoribonuclease L-PSP
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_2037_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15972..16871
DNA (900bp) protein (300aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
2-hydroxy-3-oxopropionate reductase id=4472507 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
14_0929_05_30cm_scaffold_2037_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16868..17437)
DNA (570bp) protein (190aa)
Predicted protein id=4472501 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Micromonas taxon_order=Mamiellales taxon_class=Mamiellophyceae phylum=Chlorophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_2037_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17496..18692)
DNA (1197bp) protein (399aa)
Putative dehydratase/racemase id=4472498 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dehydratase/racemase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_2037_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18711..19004
DNA (294bp) protein (98aa)
5-methyltetrahydrofolate--homocysteine methyltransferase id=4472497 bin=GWA2_Methylomirabilis_73_35 species=Bacillus coagulans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
5-methyltetrahydrofolate--homocysteine methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 18 items

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