ggKbase home page

14_0929_05_30cm_scaffold_2320

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_05_30cm_scaffold_2320_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2..1033
DNA (1032bp) protein (344aa)
ftsH; cell division protein FtsH (EC:3.4.24.-) id=14627774 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_2320_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1030..2505
DNA (1476bp) protein (492aa)
trypsin domain/PDZ domain-containing protein; K01362 [EC:3.4.21.-] id=14627773 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
degP-2; periplasmic trypsin-like serine protease lipoprotein DegP
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_2320_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2636..3655
DNA (1020bp) protein (340aa)
Chaperone protein DnaJ id=4428160 bin=GWC2_Methylomirabilis_70_24 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
chaperone DnaJ domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_2320_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3667..6264
DNA (2598bp) protein (866aa)
ClpA; ATPase with chaperone activity, ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB id=14628005 bin=bin7_NC10_sister species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin7_NC10_sister organism_group=NC10
ClpA; ATPase with chaperone activity, ATP-binding subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_2320_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6400..7659
DNA (1260bp) protein (420aa)
Major facilitator superfamily MFS_1 id=2304903 bin=GWA2_Methylomirabilis_73_35 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar phosphate permease
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_2320_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(7681..9456)
DNA (1776bp) protein (592aa)
Putative gamma-glutamyltranspeptidase id=2304933 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gamma-glutamyltranspeptidase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_05_30cm_scaffold_2320_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9501..10247
DNA (747bp) protein (249aa)
Peptidase C26 id=2304934 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase C26
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_2320_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10249..11100)
DNA (852bp) protein (284aa)
Metallo-beta-lactamase superfamily protein id=4401260 bin=GWC2_Methylomirabilis_70_24 species=uncultured bacterium CSL144 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_30cm_scaffold_2320_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(11114..11815)
DNA (702bp) protein (234aa)
Putative branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z0T2_9BRAD
putative branched-chain amino acid ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_05_30cm_scaffold_2320_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11809..12570)
DNA (762bp) protein (254aa)
Branched-chain amino acid ABC transporter,ATP-binding component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIU8_AZOBR
branched-chain amino acid ABC transporter,ATP-binding component
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
14_0929_05_30cm_scaffold_2320_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(12563..13507)
DNA (945bp) protein (315aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Oceanibaculum indicum P24 RepID=K2KG37_9PROT
putative branched-chain amino acid ABC transporter, permease protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_05_30cm_scaffold_2320_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(13507..14433)
DNA (927bp) protein (309aa)
ABC transporter permease protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GGN8_9BRAD rbh
ABC transporter permease rbh
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_05_30cm_scaffold_2320_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(14471..15643)
DNA (1173bp) protein (391aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G5ZWH5_9PROT rbh
putative ABC transporter substrate binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_05_30cm_scaffold_2320_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(15830..16249)
DNA (420bp) protein (140aa)
4-hydroxybenzoyl-CoA thioesterase id=4401184 bin=GWC2_Methylomirabilis_70_24 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
4-hydroxybenzoyl-CoA thioesterase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_05_30cm_scaffold_2320_15
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16627..16935
DNA (309bp) protein (103aa)
carboxymuconolactone decarboxylase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B70997
Uncharacterized protein {ECO:0000313|EMBL:ETX05837.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
carboxymuconolactone decarboxylase
14_0929_05_30cm_scaffold_2320_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17263..17886
DNA (624bp) protein (208aa)
Putative hydrolases or acyltransferases(Alpha/beta hydrolase superfamily) protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U2Y7_9PROT
alpha/beta family hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Displaying 16 items

View Taxonomy