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14_0929_05_30cm_scaffold_5593

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_05_30cm_scaffold_5593_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2..823)
DNA (822bp) protein (274aa)
WD40 domain-containing protein; K03641 TolB protein id=14626728 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
tolB; protein tolB
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_5593_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(828..1673)
DNA (846bp) protein (282aa)
TonB family protein id=4034141 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative periplasmic protein TonB
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_5593_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1696..2124)
DNA (429bp) protein (143aa)
tolR; protein TolR; K03560 biopolymer transport protein TolR id=14626726 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
tolR; protein TolR
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_5593_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2114..2839)
DNA (726bp) protein (242aa)
tolQ protein; K03562 biopolymer transport protein TolQ id=14626725 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
protein TolQ
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_30cm_scaffold_5593_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2893..3654
DNA (762bp) protein (254aa)
hypothetical protein id=2773093 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_30cm_scaffold_5593_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3654..4427
DNA (774bp) protein (258aa)
Beta-lactamase domain protein id=4489512 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
beta-lactamase domain-containing protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_5593_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4574..5146)
DNA (573bp) protein (191aa)
Putative 3-methyladenine DNA glycosylase id=2773084 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA-3-methyladenine glycosylase
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_5593_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5147..6367)
DNA (1221bp) protein (407aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] id=14626721 bin=bin7_NC10_sister species=Frankia sp. QA3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
threonine synthase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_30cm_scaffold_5593_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6364..7317)
DNA (954bp) protein (318aa)
Putative uncharacterized protein id=2817611 bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_30cm_scaffold_5593_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7685..8758)
DNA (1074bp) protein (358aa)
Putative uncharacterized protein id=2773068 bin=GWA2_Methylomirabilis_73_35 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dihydroorotate dehydrogenase
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_30cm_scaffold_5593_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8810..9799)
DNA (990bp) protein (330aa)
Luciferase family protein id=2817356 bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
luciferase-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_0929_05_30cm_scaffold_5593_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9895..10260
DNA (366bp) protein (122aa)
Cupin_2 domain containing protein id=2773060 bin=GWA2_Methylomirabilis_73_35 species=Pyrobaculum sp. 1860 genus=Pyrobaculum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cupin 2 protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_30cm_scaffold_5593_13
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(10270..11307)
DNA (1038bp) protein (346aa)
Periplasmic solute binding protein id=4480276 bin=GWC2_Elusimicrobia_64_44 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
periplasmic solute binding protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
14_0929_05_30cm_scaffold_5593_14
unknown

Not on your lists

11344..12594
DNA (1251bp) protein (417aa)

This feature has no annotations

14_0929_05_30cm_scaffold_5593_15
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(12602..13654)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036CD508
regulatory protein IclR
Tax=RBG_16_Chloroflexi_52_11_curated
14_0929_05_30cm_scaffold_5593_16
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13666..14685)
DNA (1020bp) protein (340aa)
Cyclase family protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2M9E1_9PROT
Cyclase family protein {ECO:0000313|EMBL:EKF08823.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
cyclase family protein
14_0929_05_30cm_scaffold_5593_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14834..16450
DNA (1617bp) protein (539aa)
putative thymidylate synthase (EC:2.1.1.-)
Thymidylate synthase complementing protein ThyX id=2773055 bin=GWA2_Methylomirabilis_73_35 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_30cm_scaffold_5593_18
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16618..17208
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRJ5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:ETX00824.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
TetR family transcriptional regulator
Displaying 18 items

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