ggKbase home page

14_0929_05_30cm_scaffold_25125

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_05_30cm_scaffold_25125_1
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

3..686
DNA (684bp) protein (228aa)
Beta-lactamase class C and other penicillin binding protein n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DW80_METI4
ampC; Beta-lactamase class C and other penicillin binding protein
Beta-lactamase class C and other penicillin binding protein {ECO:0000313|EMBL:ACD83583.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
14_0929_05_30cm_scaffold_25125_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

646..1368
DNA (723bp) protein (241aa)
LemA family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDI8_9BACT
LemA family protein {ECO:0000313|EMBL:EEF62134.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
LemA family protein
14_0929_05_30cm_scaffold_25125_3
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1410..2219
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWH9_OPITP
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
14_0929_05_30cm_scaffold_25125_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2225..2662
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDI6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62132.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
14_0929_05_30cm_scaffold_25125_5
unknown

Not on your lists

2693..2974
DNA (282bp) protein (94aa)

This feature has no annotations

14_0929_05_30cm_scaffold_25125_6
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2949..3992
DNA (1044bp) protein (348aa)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBM6_9BACT
DNA-directed RNA polymerase subunit alpha
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0929_05_30cm_scaffold_25125_7
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


4026..4595
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI00037277C8
rplQ; 50S ribosomal protein L17
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0929_05_30cm_scaffold_25125_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(4614..4820)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZXH7_DESOH
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
14_0929_05_30cm_scaffold_25125_9
unknown

Not on your lists

comp(4880..5038)
DNA (159bp) protein (53aa)

This feature has no annotations

14_0929_05_30cm_scaffold_25125_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5094..5468
DNA (375bp) protein (125aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NADH-quinone oxidoreductase subunit A n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFY1_9BACT
NADH dehydrogenase I subunit A
14_0929_05_30cm_scaffold_25125_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5574..6197
DNA (624bp) protein (208aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NADH-quinone oxidoreductase subunit B n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFY0_9BACT
NADH dehydrogenase subunit B
14_0929_05_30cm_scaffold_25125_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6200..6874
DNA (675bp) protein (225aa)
NADH-quinone oxidoreductase {ECO:0000256|RuleBase:RU003582}; EC=1.6.5.11 {ECO:0000256|RuleBase:RU003582};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NADH-quinone oxidoreductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFX9_9BACT
NADH dehydrogenase domain-containing protein
14_0929_05_30cm_scaffold_25125_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6972..7322
DNA (351bp) protein (117aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NADH-quinone oxidoreductase subunit D n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFX8_9BACT
NADH dehydrogenase I subunit D
Displaying 13 items

View Taxonomy