ggKbase home page

14_0929_05_30cm_scaffold_6712

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_05_30cm_scaffold_6712_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(2..757)
DNA (756bp) protein (252aa)
Phosphoesterase RecJ domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTM4_9BACT
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:EDY21878.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
single-stranded-DNA-specific exonuclease RecJ
14_0929_05_30cm_scaffold_6712_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(879..1718)
DNA (840bp) protein (280aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR7_9BACT
hypothetical protein
14_0929_05_30cm_scaffold_6712_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1838..2983)
DNA (1146bp) protein (382aa)
Radical SAM domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR8_9BACT
Radical SAM domain protein {ECO:0000313|EMBL:EDY21860.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
thiH; thiamine biosynthesis enzyme ThiH or related uncharacterized enzyme
14_0929_05_30cm_scaffold_6712_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

3121..3723
DNA (603bp) protein (201aa)
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR9_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ECF subfamily RNA polymerase sigma-24 subunit
14_0929_05_30cm_scaffold_6712_5
unknown

Not on your lists

comp(3611..3907)
DNA (297bp) protein (99aa)

This feature has no annotations

14_0929_05_30cm_scaffold_6712_6
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3944..4357)
DNA (414bp) protein (138aa)
Hypothetical membrane protein id=4616756 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWC2_Syntrophus_56_31_curated
14_0929_05_30cm_scaffold_6712_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

4424..4807
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D098_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20412.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_0929_05_30cm_scaffold_6712_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

4935..5171
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D097_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20411.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_0929_05_30cm_scaffold_6712_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(5207..5818)
DNA (612bp) protein (204aa)
30S ribosomal protein S4 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ7_9BACT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S4
14_0929_05_30cm_scaffold_6712_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(5851..6516)
DNA (666bp) protein (222aa)
30S ribosomal protein S11 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ6_9BACT
30S ribosomal protein S11
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0929_05_30cm_scaffold_6712_11
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(6529..6924)
DNA (396bp) protein (132aa)
30S ribosomal protein S13 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ5_9BACT
rpsM; 30S ribosomal protein S13
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0929_05_30cm_scaffold_6712_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7110..7328)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ4_9BACT
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
translation initiation factor IF-1
14_0929_05_30cm_scaffold_6712_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7301..8077)
DNA (777bp) protein (259aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Methionine aminopeptidase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ3_9BACT
map; methionine aminopeptidase
14_0929_05_30cm_scaffold_6712_14
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8074..8667)
DNA (594bp) protein (198aa)
adenylate kinase n=1 Tax=Thioalkalivibrio RepID=UPI00037297C6
adenylate kinase
Tax=GWF1_Rhodobacteraceae_65_7_curated
14_0929_05_30cm_scaffold_6712_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(8728..10755)
DNA (2028bp) protein (676aa)
Protein translocase subunit SecY n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ2_9BACT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
secY; preprotein translocase subunit SecY
14_0929_05_30cm_scaffold_6712_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(10742..11305)
DNA (564bp) protein (188aa)
30S ribosomal protein S5 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ0_9BACT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S5
14_0929_05_30cm_scaffold_6712_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(11508..12047)
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY8_9BACT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rplF; 50S ribosomal protein L6
14_0929_05_30cm_scaffold_6712_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(12053..12451)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY7_9BACT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rpsH; 30S ribosomal protein S8
14_0929_05_30cm_scaffold_6712_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(12459..13031)
DNA (573bp) protein (191aa)
50S ribosomal protein L5 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY6_9BACT
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rplE; 50S ribosomal protein L5
14_0929_05_30cm_scaffold_6712_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(13087..13413)
DNA (327bp) protein (109aa)
50S ribosomal protein L24 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY5_9BACT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rplX; 50S ribosomal protein L24
14_0929_05_30cm_scaffold_6712_21
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(13379..13654)
DNA (276bp) protein (92aa)
50S ribosomal protein L14 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY4_9BACT
rplN; 50S ribosomal protein L14
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0929_05_30cm_scaffold_6712_22
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(13689..13985)
DNA (297bp) protein (99aa)
30S ribosomal protein S17 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY3_9BACT
30S ribosomal protein S17
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0929_05_30cm_scaffold_6712_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(13989..14480)
DNA (492bp) protein (164aa)
50S ribosomal protein L24 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY5_9BACT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rplX; 50S ribosomal protein L24
Displaying 23 items

View Taxonomy