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14_0929_05_30cm_scaffold_10318

Search features with annotation key words

Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_05_30cm_scaffold_10318_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3..563)
DNA (561bp) protein (187aa)
DNA repair protein RadC n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZF8_9BACT
DNA repair protein RadC {ECO:0000313|EMBL:EDY20122.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
radC; DNA repair protein RadC
14_0929_05_30cm_scaffold_10318_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(585..1628)
DNA (1044bp) protein (348aa)
Polyprenyl synthetase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZH2_9BACT rbh
Polyprenyl synthetase {ECO:0000313|EMBL:EDY20136.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ispA; Geranylgeranyl pyrophosphate synthase
14_0929_05_30cm_scaffold_10318_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1737..2510)
DNA (774bp) protein (258aa)
Biotin/lipoate A/B protein ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYR1_9BACT
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EDY20602.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
lplA; lipoate-protein ligase A
14_0929_05_30cm_scaffold_10318_4

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comp(2516..3208)
DNA (693bp) protein (231aa)
Orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Uncharacterized protein {ECO:0000313|EMBL:KKN64595.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
orotidine 5''''-phosphate decarboxylase id=8266117 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
14_0929_05_30cm_scaffold_10318_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3289..4122
DNA (834bp) protein (278aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Y4_9BACT
14_0929_05_30cm_scaffold_10318_6
R_Omnitrophica_50_24, Omnitrophica, Bacteria

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comp(4183..4938)
DNA (756bp) protein (252aa)
Putative uncharacterized protein id=3435911 bin=GWC2_Elusimicrobia_64_44 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_50_24_curated
14_0929_05_30cm_scaffold_10318_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5021..6943)
DNA (1923bp) protein (641aa)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:EEF57977.1}; EC=1.3.99.1 {ECO:0000313|EMBL:EEF57977.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQF3_9BACT
14_0929_05_30cm_scaffold_10318_8
Leptospira noguchii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(6940..7590)
DNA (651bp) protein (217aa)
Succinate dehydrogenase cytochrome B subunit, b558 family n=4 Tax=Leptospira RepID=M6HV41_9LEPT
Succinate dehydrogenase cytochrome B subunit, b558 family {ECO:0000313|EMBL:EMO89661.1}; TaxID=1193053 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira noguchii str. 2001034031.;"
sdhC; succinate dehydrogenase cytochrome subunit B
14_0929_05_30cm_scaffold_10318_9
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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8147..9268
DNA (1122bp) protein (374aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZW14_OPITP
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:ACB76028.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
14_0929_05_30cm_scaffold_10318_10
unknown

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9496..10686
DNA (1191bp) protein (397aa)

This feature has no annotations

14_0929_05_30cm_scaffold_10318_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(10837..13356)
DNA (2520bp) protein (840aa)
Capsular exopolysaccharide family {ECO:0000313|EMBL:EEF63156.1}; EC=2.7.10.2 {ECO:0000313|EMBL:EEF63156.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Capsular exopolysaccharide family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAX1_9BACT
capsular exopolysaccharide family protein
14_0929_05_30cm_scaffold_10318_12
R_Omnitrophica_44_11, Omnitrophica, Bacteria

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comp(13427..13747)
DNA (321bp) protein (107aa)
Polysaccharide biosynthesis/export protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UD95_MYXSD
polysaccharide biosynthesis/export protein
Tax=RIFCSPLOWO2_02_FULL_Omnitrophica_44_11_curated
Displaying 12 items

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