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14_0929_05_30cm_scaffold_7310

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_05_30cm_scaffold_7310_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(374..901)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XT24_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57014.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
14_0929_05_30cm_scaffold_7310_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1222..2337)
DNA (1116bp) protein (372aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8Y3_9BACT
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
deoxyguanosinetriphosphate triphosphohydrolase
14_0929_05_30cm_scaffold_7310_3
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2466..3494
DNA (1029bp) protein (343aa)
O-methyltransferase family 2 n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HL71_CYAP4
O-methyltransferase 2
O-methyltransferase family 2 {ECO:0000313|EMBL:ACL45303.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
14_0929_05_30cm_scaffold_7310_4
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3672..3995
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IKN2_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB62277.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
14_0929_05_30cm_scaffold_7310_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4007..5329)
DNA (1323bp) protein (441aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Catalytic domain of component of various dehydrogenase complexes n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTW7_9BACT
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
14_0929_05_30cm_scaffold_7310_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5373..6356)
DNA (984bp) protein (328aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G5D3_ECHVK
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component subunit beta
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0929_05_30cm_scaffold_7310_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(6353..7330)
DNA (978bp) protein (326aa)
pdhA; Pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139, ECO:0000313|EMBL:CBE68658.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Pyruvate dehydrogenase E1 component, alpha subunit n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFX7_9BACT
14_0929_05_30cm_scaffold_7310_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7336..7932)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZP3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20207.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
14_0929_05_30cm_scaffold_7310_9
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(8066..8314)
DNA (249bp) protein (83aa)
30S ribosomal protein S20 n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNA8_9SYNE
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
14_0929_05_30cm_scaffold_7310_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8367..9101)
DNA (735bp) protein (245aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0S1_9BACT
ErfK/YbiS/YcfS/YnhG family protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_0929_05_30cm_scaffold_7310_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9134..10573)
DNA (1440bp) protein (480aa)
Glycosyl transferase family 2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0R9_9BACT
Glycosyl transferase family 2 {ECO:0000313|EMBL:EDY19931.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glycosyl transferase, family 2
14_0929_05_30cm_scaffold_7310_12
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

10847..13327
DNA (2481bp) protein (827aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZE9_OPITP
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ACB76352.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
14_0929_05_30cm_scaffold_7310_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13329..13631)
DNA (303bp) protein (101aa)
Histone family protein DNA-binding protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D775_9BACT
Histone family protein DNA-binding protein {ECO:0000313|EMBL:EDY17726.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
histone family protein DNA-binding protein
14_0929_05_30cm_scaffold_7310_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13908..14876)
DNA (969bp) protein (323aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Ribonuclease n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D776_9BACT
ribonuclease HIII
14_0929_05_30cm_scaffold_7310_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14913..15995
DNA (1083bp) protein (361aa)
HhH-GPD family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D777_9BACT rbh
HhH-GPD family protein {ECO:0000313|EMBL:EDY17728.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
HhH-GPD family protein
14_0929_05_30cm_scaffold_7310_16
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15943..16416)
DNA (474bp) protein (158aa)
Citrate transporter protein n=1 Tax=planctomycete KSU-1 RepID=I3IIV0_9PLAN
Na+/H+ antiporter NhaD and related arsenite permeases {ECO:0000313|EMBL:GAN32588.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
arsenical pump membrane protein
14_0929_05_30cm_scaffold_7310_17
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16388..16966)
DNA (579bp) protein (193aa)
Citrate transporter n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HC84_ANADF
citrate transporter
Citrate transporter {ECO:0000313|EMBL:ABS26330.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
14_0929_05_30cm_scaffold_7310_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

17286..18161
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5H2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18377.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
yicC; hypothetical protein
14_0929_05_30cm_scaffold_7310_19
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

18154..18765
DNA (612bp) protein (204aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
Guanylate kinase n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JZB3_9BACT
gmk; guanylate kinase
14_0929_05_30cm_scaffold_7310_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

18804..19427
DNA (624bp) protein (208aa)
Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:EDY18379.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EDY18379.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Phosphopantothenoylcysteine decarboxylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5H4_9BACT
phosphopantothenate--cysteine ligase
14_0929_05_30cm_scaffold_7310_21
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

19505..19903
DNA (399bp) protein (133aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase; Phosphopantothenate-cysteine ligase id=4085216 bin=GWF2_Planctomycetes_50_10 species=Halanaerobium saccharolyticum genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=GWF2_Planctomycetes_50_10_curated
14_0929_05_30cm_scaffold_7310_22
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

20353..21099
DNA (747bp) protein (249aa)
Inositol-phosphate phosphatase {ECO:0000313|EMBL:EDY18380.1}; EC=3.1.3.25 {ECO:0000313|EMBL:EDY18380.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
inositol-phosphate phosphatase (EC:3.1.3.25)
Inositol-phosphate phosphatase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5H5_9BACT
14_0929_05_30cm_scaffold_7310_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

21118..21606
DNA (489bp) protein (163aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5H6_9BACT
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
14_0929_05_30cm_scaffold_7310_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

21655..23079
DNA (1425bp) protein (475aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16) rbh
Cysteine--tRNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5H7_9BACT
Displaying 24 items

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