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14_0929_05_40cm_scaffold_611

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_05_40cm_scaffold_611_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3..875
DNA (873bp) protein (291aa)
Quinone oxidoreductase (NADPH:quinone reductase) id=4380010 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_611_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1046..1963
DNA (918bp) protein (306aa)
Import inner membrane translocase subunit Tim44 id=4957118 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
import inner membrane translocase subunit Tim44
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_40cm_scaffold_611_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1992..3617
DNA (1626bp) protein (542aa)
AsmA family protein id=4379996 bin=GWA2_Methylomirabilis_73_35 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AsmA family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_611_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3601..4422)
DNA (822bp) protein (274aa)
Methylase involved in ubiquinone/menaquinone biosynthesis id=4379994 bin=GWA2_Methylomirabilis_73_35 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UbiE/COQ5 family methlytransferase
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_40cm_scaffold_611_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

4508..5638
DNA (1131bp) protein (377aa)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] id=14625051 bin=bin7_NC10_sister species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.1)
Tax=CSP1_6_Rokubacteria
14_0929_05_40cm_scaffold_611_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5651..6892
DNA (1242bp) protein (414aa)
Oxidoreductase domain protein id=3024538 bin=GWC2_Methylomirabilis_70_16 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Oxidoreductase domain protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_611_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6889..7767
DNA (879bp) protein (293aa)
Diaminopimelate epimerase (EC:5.1.1.7) rbh
Diaminopimelate epimerase id=3024534 bin=GWC2_Methylomirabilis_70_16 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_05_40cm_scaffold_611_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7764..8348
DNA (585bp) protein (195aa)
Putative uncharacterized protein id=4379983 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DprA/Smf-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_611_9
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

comp(8335..9057)
DNA (723bp) protein (241aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:CCQ89961.1}; EC=6.3.3.2 {ECO:0000313|EMBL:CCQ89961.1};; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YWD3_9BACT
5-formyltetrahydrofolate cyclo-ligase
14_0929_05_40cm_scaffold_611_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9094..10143
DNA (1050bp) protein (350aa)
Aminoglycoside phosphotransferase id=4923991 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
fadE36; aminoglycoside phosphotransferase rbh
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_05_40cm_scaffold_611_11
unknown

Not on your lists

comp(10158..10538)
DNA (381bp) protein (127aa)

This feature has no annotations

14_0929_05_40cm_scaffold_611_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10818..11567
DNA (750bp) protein (250aa)
Putative uncharacterized protein id=2811602 bin=GWC2_Methylomirabilis_70_24 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
14_0929_05_40cm_scaffold_611_13
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(11572..12414)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IGX8_9PLAN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
14_0929_05_40cm_scaffold_611_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12625..13305)
DNA (681bp) protein (227aa)
Electron transport protein SCO1/SenC n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3ISK3_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
14_0929_05_40cm_scaffold_611_15
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13339..15342)
DNA (2004bp) protein (668aa)
bilirubin oxidase (EC:1.3.3.5)
Bilirubin oxidase {ECO:0000313|EMBL:ACB32344.1}; EC=1.3.3.5 {ECO:0000313|EMBL:ACB32344.1};; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Bilirubin oxidase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5Z7_LEPCP
14_0929_05_40cm_scaffold_611_16
RLO_PLX_64_10, Bacteria

Not on your lists

comp(15563..16432)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B709D6
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
14_0929_05_40cm_scaffold_611_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16443..17651)
DNA (1209bp) protein (403aa)
isovaleryl-CoA dehydrogenase (EC:1.3.99.10)
Putative acyl-CoA dehydrogenase id=3814357 bin=GWC2_Methylomirabilis_70_24 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
14_0929_05_40cm_scaffold_611_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17674..18777)
DNA (1104bp) protein (368aa)
Putative uncharacterized protein id=3024530 bin=GWC2_Methylomirabilis_70_16 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_611_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

18810..20045
DNA (1236bp) protein (412aa)
Citrate transporter n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YG3_SOLUE
citrate transporter
Citrate transporter {ECO:0000313|EMBL:ABJ85302.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0929_05_40cm_scaffold_611_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

20104..21327
DNA (1224bp) protein (408aa)
RND family efflux transporter MFP subunit id=14625838 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RND family efflux transporter MFP subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_0929_05_40cm_scaffold_611_21
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

21518..24793
DNA (3276bp) protein (1092aa)
Cation/multidrug efflux pump; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=14625839 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Cation/multidrug efflux pump
Tax=CSP1_6_Rokubacteria
14_0929_05_40cm_scaffold_611_22
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24797..25711)
DNA (915bp) protein (305aa)
id=4628299 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
14_0929_05_40cm_scaffold_611_23
unknown

Not on your lists

comp(25752..27140)
DNA (1389bp) protein (463aa)

This feature has no annotations

14_0929_05_40cm_scaffold_611_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(27450..29636)
DNA (2187bp) protein (729aa)
PHP C-terminal domain protein id=4426899 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phP C-terminal domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_05_40cm_scaffold_611_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

29665..30033
DNA (369bp) protein (123aa)
Putative uncharacterized protein id=4379979 bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_40cm_scaffold_611_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

30043..30225
DNA (183bp) protein (61aa)
hypothetical protein id=4379977 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_40cm_scaffold_611_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

30278..31150
DNA (873bp) protein (291aa)
Periplasmic binding protein id=4379975 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_40cm_scaffold_611_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(31169..32893)
DNA (1725bp) protein (575aa)
Putative Hybrid sensor histidine kinase id=2937937 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PAS sensor protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_611_29
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32893..33366)
DNA (474bp) protein (158aa)
Carbon-monoxide dehydrogenase {ECO:0000313|EMBL:AIG74231.1}; EC=1.2.99.2 {ECO:0000313|EMBL:AIG74231.1};; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
carbon monoxide dehydrogenase small chain (COdehydrogenase subunit S) (CO-DH S) (EC:1.2.99.2); K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] id=14631763 bin=bin9_gal15 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
coxS; carbon-monoxide dehydrogenase small subunit
14_0929_05_40cm_scaffold_611_30
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33380..34237)
DNA (858bp) protein (286aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGE1_THEM7
molybdopterin dehydrogenase FAD-binding protein
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:ADU51593.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
Displaying items 1-30 of 33 in total

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