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14_0929_05_40cm_scaffold_5609

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_05_40cm_scaffold_5609_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..548)
DNA (546bp) protein (182aa)
LPPG:FO 2-phospho-L-lactate transferase (EC:2.7.1.-)
2-phospho-L-lactate transferase id=4828294 bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_40cm_scaffold_5609_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(556..1107)
DNA (552bp) protein (184aa)
hypothetical protein id=2338861 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_40cm_scaffold_5609_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1094..1381)
DNA (288bp) protein (96aa)
Transcriptional dual regulator HU-beta id=3762996 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hupB; transcriptional dual regulator HU-beta
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_40cm_scaffold_5609_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(1450..2724)
DNA (1275bp) protein (425aa)
cofH; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (EC:2.5.1.-)
FO synthase subunit 2 id=3762998 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_05_40cm_scaffold_5609_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2702..3844)
DNA (1143bp) protein (381aa)
FO synthase subunit 1 id=3763000 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cofG; FO synthase subunit 1
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_40cm_scaffold_5609_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3941..4918)
DNA (978bp) protein (326aa)
Coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases id=3763002 bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium HF0200_06I16 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_5609_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5017..5448
DNA (432bp) protein (144aa)
thioesterase; phenylacetic acid degradation protein; ComA id=14625781 bin=bin7_NC10_sister species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_5609_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5445..6890
DNA (1446bp) protein (482aa)
Histidine kinase id=1767179 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integral membrane sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_5609_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6887..7255
DNA (369bp) protein (123aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_05_40cm_scaffold_5609_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7378..8874
DNA (1497bp) protein (499aa)
Signal transduction histidine kinase, nitrogen specific, NtrB id=1767175 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_5609_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8871..10382
DNA (1512bp) protein (504aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=1767173 bin=GWA2_Methylomirabilis_73_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
two component, sigma54 specific, transcriptional regulator, Fis family
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_5609_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10379..10732
DNA (354bp) protein (118aa)
Nitrogen regulatory protein P-II id=4348866 bin=GWF2_Methylomirabilis_70_14 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nitrogen regulatory protein PII
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_05_40cm_scaffold_5609_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10726..12015
DNA (1290bp) protein (430aa)
Ammonium transport protein (Amt family) id=4828258 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amtB; ammonium transport protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_5609_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12112..13401
DNA (1290bp) protein (430aa)
Glutamine synthetase id=4348817 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glutamine synthetase
Tax=GWA2_Rokubacteria_70_23_curated
14_0929_05_40cm_scaffold_5609_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13592..14173
DNA (582bp) protein (194aa)
Response regulator receiver id=4759489 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Response regulator receiver
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_5609_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14394..15689
DNA (1296bp) protein (432aa)
Twin-arginine translocation pathway signal (Fragment) id=3784197 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livG; branched-chain amino acid ABC transporter periplasmic protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_5609_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15689..17335
DNA (1647bp) protein (549aa)
Branched-chain amino acid transport system, permease component id=3784198 bin=GWA2_Methylomirabilis_73_35 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Urea ABC transporter, permease protein UrtB
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_40cm_scaffold_5609_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17322..18479
DNA (1158bp) protein (386aa)
Urea ABC transporter, permease protein UrtC id=3784199 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid ABC transporter permease
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_40cm_scaffold_5609_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

18476..19267
DNA (792bp) protein (264aa)
urea ABC transporter ATP-binding protein (EC:3.6.3.28)
Urea ABC transporter, ATP-binding protein UrtD id=3784200 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_40cm_scaffold_5609_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19254..19943
DNA (690bp) protein (230aa)
Urea ABC transporter, ATP-binding protein UrtE id=3784201 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
urea ABC transporter ATP-binding protein UrtE
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_40cm_scaffold_5609_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

20059..20361
DNA (303bp) protein (101aa)
urease subunit gamma (EC:3.5.1.5); K01430 urease subunit gamma [EC:3.5.1.5] id=14625794 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
urease subunit gamma (EC:3.5.1.5)
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_40cm_scaffold_5609_22
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20875..21348)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000368B3CE
Arylsulfatase A family protein {ECO:0000313|EMBL:EIG56515.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
arylsulfatase
14_0929_05_40cm_scaffold_5609_23
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21348..22940)
DNA (1593bp) protein (531aa)
Arylsulfatase A family protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2Q9R1_9BRAD
Arylsulfatase A family protein {ECO:0000313|EMBL:EIG56517.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
arylsulfatase protein
14_0929_05_40cm_scaffold_5609_24
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23091..23819)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003769286
Lipoprotein, putative {ECO:0000313|EMBL:EAR21553.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
putative lipoprotein
14_0929_05_40cm_scaffold_5609_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

24148..24495
DNA (348bp) protein (116aa)
urease subunit beta (EC:3.5.1.5)
Urease subunit beta id=3784203 bin=GWA2_Methylomirabilis_73_35 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_40cm_scaffold_5609_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24580..25602
DNA (1023bp) protein (341aa)
urease subunit alpha; K01428 urease subunit alpha [EC:3.5.1.5] id=14625796 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
urease subunit alpha
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_5609_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25571..26134
DNA (564bp) protein (188aa)
ureC; urease alpha subunit (EC:3.5.1.5)
Urease subunit alpha id=2317450 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_5609_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

26149..26658
DNA (510bp) protein (170aa)
Urease accessory protein ureE id=2317449 bin=GWA2_Methylomirabilis_73_35 species=Deinococcus gobiensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ureE; urease accessory protein ureE
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_05_40cm_scaffold_5609_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

26651..27400
DNA (750bp) protein (250aa)
Urease accessory protein UreF id=2317448 bin=GWA2_Methylomirabilis_73_35 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Urease accessory protein UreF
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_05_40cm_scaffold_5609_30
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

27397..28008
DNA (612bp) protein (204aa)
Urease accessory protein UreG id=2317447 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ureG; urease accessory protein UreG
Tax=GWA2_Rokubacteria_73_35_curated
Displaying items 1-30 of 31 in total

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