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14_0929_12_30cm_scaffold_4384

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_12_30cm_scaffold_4384_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3..608
DNA (606bp) protein (202aa)
30S ribosomal protein S12P methylthiotransferase (EC:2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO id=4911884 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_4384_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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727..1074
DNA (348bp) protein (116aa)
pgpA; protein PgpA (EC:3.1.3.27)
Putative phosphatidyl-glycerophosphatase id=4911883 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium 253 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_4384_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1071..2309
DNA (1239bp) protein (413aa)
CinA-like protein id=4911882 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cinA; competence-damage inducible protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_4384_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2306..3313
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Eimeria praecox RepID=U6GQH1_9EIME
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_4384_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3310..3486
DNA (177bp) protein (59aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_4384_6
unknown

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comp(3497..3667)
DNA (171bp) protein (57aa)

This feature has no annotations

14_0929_12_30cm_scaffold_4384_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3780..4799
DNA (1020bp) protein (340aa)
Protein RecA id=4104792 bin=GWF2_Methylomirabilis_70_14 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
recA protein
Tax=CSP1_6_Rokubacteria
14_0929_12_30cm_scaffold_4384_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4809..5987
DNA (1179bp) protein (393aa)
Twitching motility protein id=4140654 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
twitching motility protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_4384_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6110..6469
DNA (360bp) protein (120aa)
recX; recombination regulator RecX; K03565 regulatory protein id=14626277 bin=bin7_NC10_sister species=Amycolatopsis nigrescens genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
recombinase RecX
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_4384_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6480..9182
DNA (2703bp) protein (901aa)
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] id=14626276 bin=bin7_NC10_sister species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
alaS; alanyl-tRNA synthetase (EC:6.1.1.7) rbh
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_30cm_scaffold_4384_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9257..9940
DNA (684bp) protein (228aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=4020045 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces himastatinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
two component sigma54 specific Fis family transcriptional regulator
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_4384_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9903..11210
DNA (1308bp) protein (436aa)
Multi-sensor hybrid histidine kinase id=4020048 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multi-sensor hybrid histidine kinase
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_4384_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11447..12244
DNA (798bp) protein (266aa)
Putative uncharacterized protein id=4020049 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia sp. YI23 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative Zn-dependent hydrolase of beta-lactamase fold protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_30cm_scaffold_4384_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12482..12781)
DNA (300bp) protein (100aa)
methyltransferase small; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] id=14626274 bin=bin7_NC10_sister species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 14 items

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