ggKbase home page

14_0929_12_30cm_scaffold_4853

Search features with annotation key words

Displaying 11 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_12_30cm_scaffold_4853_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23..1105)
DNA (1083bp) protein (361aa)
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase id=4793438 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_4853_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1113..1841)
DNA (729bp) protein (243aa)
Sigma-54 factor interaction domain-containing protein id=2883274 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
atoC12; sigma-54 dependent DNA-binding response regulator
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_4853_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1838..2737)
DNA (900bp) protein (300aa)
3-hydroxyisobutyrate dehydrogenase id=2883270 bin=GWA2_Methylomirabilis_73_35 species=Paenibacillus curdlanolyticus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
3-hydroxyisobutyrate dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_4853_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2788..3489)
DNA (702bp) protein (234aa)
Putative uncharacterized protein id=3162218 bin=GWC2_Methylomirabilis_70_16 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_4853_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3470..3979)
DNA (510bp) protein (170aa)
Putative uncharacterized protein id=3162219 bin=GWC2_Methylomirabilis_70_16 species=Catenulispora acidiphila genus=Catenulispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
14_0929_12_30cm_scaffold_4853_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3976..4602)
DNA (627bp) protein (209aa)
Fructose-2,6-bisphosphatase id=3162220 bin=GWC2_Methylomirabilis_70_16 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_30cm_scaffold_4853_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4613..6037)
DNA (1425bp) protein (475aa)
peptidase M20 n=1 Tax=Xanthomonas sacchari RepID=UPI0002630F75
peptidase M20
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_30cm_scaffold_4853_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6075..6671
DNA (597bp) protein (199aa)
methionine sulfoxide reductase A n=1 Tax=Chlorogloeopsis RepID=UPI0002E321B6
peptide methionine sulfoxide reductase
Tax=GWA2_Rokubacteria_70_23_curated
14_0929_12_30cm_scaffold_4853_9
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6677..7039
DNA (363bp) protein (121aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU361270};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
5-hydroxyisourate hydrolase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TCW8_9BRAD
transthyretin-like protein
14_0929_12_30cm_scaffold_4853_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7179..9713)
DNA (2535bp) protein (845aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=2 Tax=Chloroflexus RepID=A9WF02_CHLAA
aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_4853_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9858..10340)
DNA (483bp) protein (161aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein id=3162221 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 11 items

View Taxonomy