ggKbase home page

14_0929_12_30cm_scaffold_16923

Search features with annotation key words

Displaying 11 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_12_30cm_scaffold_16923_1
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(3..665)
DNA (663bp) protein (221aa)
Oligopeptide ABC transporter permease protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4I7_THERP
oligopeptide ABC transporter permease
Oligopeptide ABC transporter permease protein {ECO:0000313|EMBL:ACM06732.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
14_0929_12_30cm_scaffold_16923_2
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(674..1624)
DNA (951bp) protein (317aa)
Dipeptide transporter permease DppB n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0URZ8_MYCVA
glutathione ABC transporter permease
Dipeptide transporter permease DppB {ECO:0000313|EMBL:EJZ09867.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;"
14_0929_12_30cm_scaffold_16923_3
unknown

Not on your lists

comp(1621..2130)
DNA (510bp) protein (170aa)

This feature has no annotations

14_0929_12_30cm_scaffold_16923_4
unknown

Not on your lists

comp(2151..2915)
DNA (765bp) protein (255aa)

This feature has no annotations

14_0929_12_30cm_scaffold_16923_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3031..3588
DNA (558bp) protein (186aa)
Amidase {ECO:0000313|EMBL:EFW90124.1}; EC=3.5.1.4 {ECO:0000313|EMBL:EFW90124.1};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;"
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit n=1 Tax=Natronococcus occultus SP4 RepID=L0JUA9_9EURY
amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
14_0929_12_30cm_scaffold_16923_6
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3797..4444
DNA (648bp) protein (216aa)
UPI0003CFE340 related cluster n=1 Tax=unknown RepID=UPI0003CFE340 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ13044.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
14_0929_12_30cm_scaffold_16923_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4381..4791)
DNA (411bp) protein (137aa)
Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase id=4181240 bin=GWC2_Methylomirabilis_70_24 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
HemD protein
Tax=GWA2_Rokubacteria_70_23_curated
14_0929_12_30cm_scaffold_16923_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5044..5679)
DNA (636bp) protein (212aa)
Siroheme synthase id=4894275 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
siroheme synthase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
14_0929_12_30cm_scaffold_16923_9
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5682..6515)
DNA (834bp) protein (278aa)
Formate/nitrite transporter n=1 Tax=Paenibacillus lactis 154 RepID=G4HCU7_9BACL rbh
formate/nitrite transporter rbh
Formate/nitrite transporter {ECO:0000313|EMBL:EHB65873.1}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
14_0929_12_30cm_scaffold_16923_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6536..8377)
DNA (1842bp) protein (614aa)
nirA; ferredoxin-nitrite reductase (EC:1.7.7.1)
Ferredoxin-nitrite reductase id=4453411 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
14_0929_12_30cm_scaffold_16923_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9080..9412)
DNA (333bp) protein (111aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QCS1_RHOPT
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ACF00726.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
Displaying 11 items

View Taxonomy