ggKbase home page

14_0929_12_30cm_scaffold_2069

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_12_30cm_scaffold_2069_1
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(3..698)
DNA (696bp) protein (232aa)
ABC transporter related protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CUW3_TRURR
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADI14104.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
14_0929_12_30cm_scaffold_2069_2
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(691..1473)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00035C9A5B
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC62570.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ABC transporter-like protein
14_0929_12_30cm_scaffold_2069_3
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(1502..2650)
DNA (1149bp) protein (383aa)
High-affinity branched-chain amino acid ABC transporter (Substrate-binding protein) id=4128224 bin=GWF2_Nitrospirae_44_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
ABC-typ branched-chain amino acid transport system, periplasmic substrate binding component
Tax=GWF2_Nitrospirae_44_13_curated
14_0929_12_30cm_scaffold_2069_4
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2723..3214)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030A1731
acetyltransferase
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:AFV23587.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psychrophilus R15.;"
14_0929_12_30cm_scaffold_2069_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3241..4344)
DNA (1104bp) protein (368aa)
top6A; DNA topoisomerase VI subunit A (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit A n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEY5_9BACT
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
14_0929_12_30cm_scaffold_2069_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4353..6302)
DNA (1950bp) protein (650aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B id=3435283 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
14_0929_12_30cm_scaffold_2069_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6426..8456
DNA (2031bp) protein (677aa)
HEAT-like repeat-containing protein id=14430381 bin=bin3_NC10 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
14_0929_12_30cm_scaffold_2069_8
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

8453..9625
DNA (1173bp) protein (391aa)
Cyclic diguanylate phosphodiesterase n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74FB0_GEOSL
cyclic diguanylate phosphodiesterase
Tax=RBG_13_Actinobacteria_55_18_curated
14_0929_12_30cm_scaffold_2069_9
unknown

Not on your lists

9622..9930
DNA (309bp) protein (103aa)

This feature has no annotations

14_0929_12_30cm_scaffold_2069_10
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(9952..10905)
DNA (954bp) protein (318aa)
Binding-protein-dependent transport systems inner membrane component id=3721810 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
binding-protein-dependent transport system inner membrane protein
Tax=RBG_16_Armatimonadetes_67_12_curated
14_0929_12_30cm_scaffold_2069_11
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(10943..12484)
DNA (1542bp) protein (514aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RSC9_SPHGB
ABC transporter periplasmic protein
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:ADY14329.1}; Flags: Precursor;; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
14_0929_12_30cm_scaffold_2069_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12531..13301)
DNA (771bp) protein (257aa)
Binding-protein-dependent transport systems inner membrane component id=3721734 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
binding-protein-dependent transport systems inner membrane component
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_12_30cm_scaffold_2069_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13358..14332)
DNA (975bp) protein (325aa)
Putative uncharacterized protein id=3938568 bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Displaying 13 items

View Taxonomy