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14_0929_12_30cm_scaffold_2092

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_12_30cm_scaffold_2092_1

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3..482
DNA (480bp) protein (160aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glycogen debranching enzyme GlgX n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RWQ6_9PLAN
glgX1; glycosyl hydrolase (glycogen debranching enzyme)
14_0929_12_30cm_scaffold_2092_2
unknown

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comp(675..1004)
DNA (330bp) protein (110aa)

This feature has no annotations

14_0929_12_30cm_scaffold_2092_3
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1346..1723
DNA (378bp) protein (126aa)
Transcriptional activator n=2 Tax=Pseudomonas RepID=O50213_9PSED
two-component response regulator
Putative two-component response regulator {ECO:0000313|EMBL:AJA17112.1}; TaxID=1215087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S12.;"
14_0929_12_30cm_scaffold_2092_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1913..4642
DNA (2730bp) protein (910aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
nodV1; nodulation protein V (EC:2.7.13.3)
histidine kinase n=1 Tax=Ochrobactrum anthropi RepID=UPI000288EFE6
14_0929_12_30cm_scaffold_2092_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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4639..5283
DNA (645bp) protein (215aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK86_KORVE
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABF42714.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_0929_12_30cm_scaffold_2092_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5370..6044
DNA (675bp) protein (225aa)
ECF subfamily RNA polymerase sigma factor id=4751264 bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sigW5; ECF subfamily RNA polymerase sigma factor
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_12_30cm_scaffold_2092_7
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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6052..6492
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0003060D5D
Uncharacterized protein {ECO:0000313|EMBL:KIJ78365.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
transcriptional regulator
14_0929_12_30cm_scaffold_2092_8
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(6547..7986)
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E1D96
NodT family RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:AEU35209.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
14_0929_12_30cm_scaffold_2092_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(7983..9200)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000380D606 rbh
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABJ84381.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0929_12_30cm_scaffold_2092_10
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(9200..12334)
DNA (3135bp) protein (1045aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037FC15C rbh
Acriflavin resistance protein {ECO:0000313|EMBL:AEU35211.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
acriflavin resistance protein
14_0929_12_30cm_scaffold_2092_11
unknown

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12614..13003
DNA (390bp) protein (130aa)

This feature has no annotations

14_0929_12_30cm_scaffold_2092_12
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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13451..13756
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4B5_9SPHI
hypothetical protein
Tax=RBG_16_Gamma2_64_11_curated
14_0929_12_30cm_scaffold_2092_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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13834..14076
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L1F6_FRASN
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
14_0929_12_30cm_scaffold_2092_14
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14157..14549
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003712DBA
Fis family GAF modulated sigma54 specific transcriptional regulator
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
Displaying 14 items

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