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14_0929_12_30cm_scaffold_2400

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_12_30cm_scaffold_2400_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

653..1885
DNA (1233bp) protein (411aa)
fatty acid desaturase id=14625248 bin=bin7_NC10_sister species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
fatty acid desaturase rbh
Tax=CSP1_6_Rokubacteria
14_0929_12_30cm_scaffold_2400_trna_1
unknown

Not on your lists

comp(3176..3248)
DNA (73bp)
transferRNA Phe
14_0929_12_30cm_scaffold_2400_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3287..3709)
DNA (423bp) protein (141aa)
Putative uncharacterized protein id=3927703 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces viridochromogenes genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_2400_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3706..5028)
DNA (1323bp) protein (441aa)
hemL; glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) (EC:5.4.3.8) rbh
Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) id=4189569 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_12_30cm_scaffold_2400_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5025..5972)
DNA (948bp) protein (316aa)
aspartate/glutamate/hydantoin racemase (EC:5.1.1.10)
Aspartate/glutamate/hydantoin racemase (Fragment) id=4189568 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus sp. HPC(L) genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_2400_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5969..6640)
DNA (672bp) protein (224aa)
Malto-oligosyltrehalose trehalohydrolase id=3927649 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
malto-oligosyltrehalose trehalohydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_2400_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6637..7452)
DNA (816bp) protein (272aa)
malto-oligosyltrehalose trehalohydrolase (EC:3.2.1.141)
Malto-oligosyltrehalose trehalohydrolase id=3927649 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_2400_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7557..9257
DNA (1701bp) protein (567aa)
putative alpha-amylase (EC:3.2.1.1)
Glycoside hydrolase family 57 id=3927648 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_2400_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9263..10504
DNA (1242bp) protein (414aa)
Glucose-1-phosphate adenylyltransferase id=3927644 bin=GWA2_Methylomirabilis_73_35 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ADP-glucose pyrophosphorylase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_2400_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10501..12882
DNA (2382bp) protein (794aa)
Glycoside hydrolase family 57 id=3927642 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
glycoside hydrolase family protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_2400_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12894..14828
DNA (1935bp) protein (645aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase id=4667512 bin=GWF2_Methylomirabilis_70_14 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_2400_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14819..15346)
DNA (528bp) protein (176aa)
hypothetical protein id=3927638 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_2400_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15447..17042)
DNA (1596bp) protein (532aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase id=3927636 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_2400_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17047..18090)
DNA (1044bp) protein (348aa)
AIR synthase-like protein id=14626878 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
AIR synthase-like protein domain-containing protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_2400_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18125..18751
DNA (627bp) protein (209aa)
Glutamate formiminotransferase id=3927630 bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glutamate formiminotransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_2400_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18809..19690)
DNA (882bp) protein (294aa)
hypothetical protein id=3927628 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_2400_16
unknown

Not on your lists

comp(19687..19779)
DNA (93bp) protein (31aa)

This feature has no annotations

14_0929_12_30cm_scaffold_2400_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19769..22009)
DNA (2241bp) protein (747aa)
Cu(2+)-binding/translocating P-type ATPase id=3927624 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
heavy metal translocating P-type ATPase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_2400_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(22009..22290)
DNA (282bp) protein (94aa)
Uncharacterized protein id=3927621 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_30cm_scaffold_2400_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(22392..22769)
DNA (378bp) protein (126aa)
hypothetical protein id=3927613 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_30cm_scaffold_2400_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(22766..24328)
DNA (1563bp) protein (521aa)
ribonuclease; K08301 ribonuclease G [EC:3.1.26.-] id=14626887 bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ribonuclease G
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_30cm_scaffold_2400_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(24383..25474)
DNA (1092bp) protein (364aa)
Rod shape-determining protein RodA id=3227259 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rod shape-determining protein RodA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_2400_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(25474..27279)
DNA (1806bp) protein (602aa)
Cell elongation specific D,D-transpeptidase id=4317187 bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mrdA; penicillin-binding protein 2 rbh
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_2400_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(27290..27778)
DNA (489bp) protein (163aa)
Putative uncharacterized protein id=4317186 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_2400_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(27778..28614)
DNA (837bp) protein (279aa)
Cell shape-determining protein MreC id=4317185 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium 293 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Rod shape-determining protein MreC
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_2400_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(28648..29679)
DNA (1032bp) protein (344aa)
Cell shape determining protein, MreB/Mrl family id=3227267 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rod shape-determining protein MreB
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_2400_26
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

30121..31152
DNA (1032bp) protein (344aa)
thiol-disulfide oxidoreductase domain-containing protein id=14627159 bin=bin7_NC10_sister species=Sulfitobacter sp. EE-36 genus=Sulfitobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
thiol-disulfide oxidoreductase domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
14_0929_12_30cm_scaffold_2400_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

31357..31560
DNA (204bp) protein (68aa)
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) id=14627158 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
cold-shock DNA-binding domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_2400_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

31767..32537
DNA (771bp) protein (257aa)
DEAD/DEAH box helicase domain protein id=2197702 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DEAD/DEAH box helicase
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_2400_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(32977..33294)
DNA (318bp) protein (106aa)
Competence protein ComEA helix-hairpin-helix repeat protein id=2197704 bin=GWA2_Methylomirabilis_73_35 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
helix-hairpin-helix repeat-containing competence protein ComEA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying items 1-30 of 32 in total

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