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14_0929_12_30cm_scaffold_814

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_12_30cm_scaffold_814_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..208)
DNA (207bp) protein (69aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] id=4783126 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glutamine amidotransferase
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_814_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(211..1587)
DNA (1377bp) protein (459aa)
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase id=4608909 bin=GWC2_Methylomirabilis_70_24 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase rbh
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_814_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1777..2658)
DNA (882bp) protein (294aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
pseudouridine synthase id=2650586 bin=GWF2_Methylomirabilis_70_14 species=Sporolactobacillus inulinus genus=Sporolactobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_814_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2718..3212)
DNA (495bp) protein (165aa)
Lipoprotein signal peptidase id=4006792 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase A8
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_30cm_scaffold_814_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3251..6079)
DNA (2829bp) protein (943aa)
ileS; isoleucine tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase id=4006793 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_814_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6168..6764)
DNA (597bp) protein (199aa)
Uncharacterized protein id=3372452 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_814_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6853..7044)
DNA (192bp) protein (64aa)
Sec-independent protein translocase protein TatA id=4006883 bin=GWC2_Methylomirabilis_70_16 species=Prosthecochloris aestuarii genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_12_30cm_scaffold_814_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7082..8986)
DNA (1905bp) protein (635aa)
selenocysteine-specific translation elongation factor (EC:2.7.7.4); K03833 selenocysteine-specific elongation factor id=14627377 bin=bin7_NC10_sister species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin7_NC10_sister organism_group=NC10
selenocysteine-specific translation elongation factor (EC:2.7.7.4) rbh
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_814_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9359..10771)
DNA (1413bp) protein (471aa)
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase id=3372624 bin=GWA2_Methylomirabilis_73_35 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_814_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10761..11045)
DNA (285bp) protein (95aa)
hypothetical protein id=3372626 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_814_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11050..11544)
DNA (495bp) protein (165aa)
id=4163878 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_814_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11522..12055)
DNA (534bp) protein (178aa)
Uncharacterized protein id=3372630 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_30cm_scaffold_814_trna_1
unknown

Not on your lists

comp(12068..12161)
DNA (94bp)
transferRNA SeC(p)
14_0929_12_30cm_scaffold_814_13
Shewanella loihica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12299..12895
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002E5E425
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO25379.1}; TaxID=323850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella loihica (strain ATCC BAA-1088 / PV-4).;"
14_0929_12_30cm_scaffold_814_14
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12892..13659
DNA (768bp) protein (256aa)
demethylmenaquinone methyltransferase (EC:2.1.1.-)
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:ABM94295.1}; EC=2.1.1.- {ECO:0000313|EMBL:ABM94295.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Demethylmenaquinone methyltransferase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFF6_METPP
14_0929_12_30cm_scaffold_814_15
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13685..14326
DNA (642bp) protein (214aa)
Methyltransferase type 11 n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SQU4_PLABD
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ADY60165.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
14_0929_12_30cm_scaffold_814_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14424..15308
DNA (885bp) protein (295aa)
Ribonuclease BN id=5027495 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribonuclease BN family protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_30cm_scaffold_814_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15469..16773)
DNA (1305bp) protein (435aa)
Soluble lytic murein transglycosylase id=5027497 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Membrane-bound lytic murein transglycosylase D
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_814_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17226..17621
DNA (396bp) protein (132aa)
hypothetical protein id=14627385 bin=bin7_NC10_sister species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_814_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17644..18288)
DNA (645bp) protein (215aa)
hypothetical protein id=5027499 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_814_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18285..19064)
DNA (780bp) protein (260aa)
Lipid A biosynthesis acyltransferase id=5027500 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lipid A biosynthesis acyltransferase
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_814_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(19151..19777)
DNA (627bp) protein (209aa)
Protein dedA (Protein DSG-1) id=3212379 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
dedA; protein dedA (Protein DSG-1)
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_12_30cm_scaffold_814_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(19785..22268)
DNA (2484bp) protein (828aa)
K(+)-insensitive pyrophosphate-energized proton pump id=3585892 bin=GWF2_Methylomirabilis_70_14 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
potassium transporter
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_0929_12_30cm_scaffold_814_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22293..22604
DNA (312bp) protein (104aa)
DNA gyrase inhibitor YacG id=1885808 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_814_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22594..23421
DNA (828bp) protein (276aa)
rhomboid family protein id=14431019 bin=bin3_NC10 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin3_NC10 organism_group=NC10
protease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 25 items

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