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14_0929_12_30cm_scaffold_987

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_12_30cm_scaffold_987_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(231..2738)
DNA (2508bp) protein (836aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein id=14628025 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
14_0929_12_30cm_scaffold_987_2
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2785..3630)
DNA (846bp) protein (282aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UBD2_9GAMM
Phosphonate ABC transporter, periplasmic phosphonate-binding protein {ECO:0000313|EMBL:EGV18250.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
ABC-type phosphate/phosphonate transport system
14_0929_12_30cm_scaffold_987_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3699..4166)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YDA9_9RHIZ
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44139.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
14_0929_12_30cm_scaffold_987_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4613..4834
DNA (222bp) protein (74aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_0929_12_30cm_scaffold_987_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4939..5211
DNA (273bp) protein (91aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_987_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5295..6011)
DNA (717bp) protein (239aa)
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) id=1906303 bin=GWA2_Methylomirabilis_73_35 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_987_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6036..6746)
DNA (711bp) protein (237aa)
ABC transport system protein id=4288073 bin=GWF2_Methylomirabilis_70_14 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
abc05a2; branched chain amino acid ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_30cm_scaffold_987_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6751..7677)
DNA (927bp) protein (309aa)
ABC-type transport system permease protein II (Probable substrates branched-chain/neutral amino acids) 2 id=4288070 bin=GWF2_Methylomirabilis_70_14 species=Marinobacter sp. ELB17 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_987_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7674..8528)
DNA (855bp) protein (285aa)
Branched-chain amino acid ABC transporter permease protein I id=1906297 bin=GWA2_Methylomirabilis_73_35 species=Haloarcula vallismortis genus=Haloarcula taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livH5; branched-chain amino acid ABC transporter permease I
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_987_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8549..9736)
DNA (1188bp) protein (396aa)
ABC-type branched-chain amino acid transport system, periplasmic component id=4288064 bin=GWF2_Methylomirabilis_70_14 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_987_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

9829..11016
DNA (1188bp) protein (396aa)
Formyl-CoA transferase (EC:2.8.3.16)
L-carnitine dehydratase/bile acid-inducible protein F id=14625352 bin=bin7_NC10_sister species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
14_0929_12_30cm_scaffold_987_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11150..11647)
DNA (498bp) protein (166aa)
Putative O-methyltransferase id=2479228 bin=GWC2_Methylomirabilis_70_24 species=uncultured marine microorganism HF4000_ANIW141A21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_987_13
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11644..12243)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. TJI49 RepID=F0GE11_9BURK
Lactonase {ECO:0000313|EMBL:KAK48121.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
lactonase, 7-bladed beta-propeller family protein
14_0929_12_30cm_scaffold_987_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12252..12773)
DNA (522bp) protein (174aa)
Alkylhydroperoxidase id=3879302 bin=GWC2_Methylomirabilis_70_16 species=Mesorhizobium alhagi genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_30cm_scaffold_987_15
unknown

Not on your lists

comp(12810..13067)
DNA (258bp) protein (86aa)

This feature has no annotations

14_0929_12_30cm_scaffold_987_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13126..14013)
DNA (888bp) protein (296aa)
hypothetical protein id=3850604 bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_987_17
Pseudomonas sp. 20_BN, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14050..14376)
DNA (327bp) protein (109aa)
Tetratricopeptide TPR_2 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AR68_RUBXD
Putative tetratricopeptide repeat domain protein {ECO:0000313|EMBL:CDZ95242.1}; TaxID=1499686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 20_BN.;"
hypothetical protein
14_0929_12_30cm_scaffold_987_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14401..14802)
DNA (402bp) protein (134aa)
hypothetical protein id=3850606 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_987_19
unknown

Not on your lists

comp(14808..14996)
DNA (189bp) protein (63aa)

This feature has no annotations

14_0929_12_30cm_scaffold_987_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15086..16243
DNA (1158bp) protein (386aa)
Diguanylate cyclase id=3850608 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
diguanylate cyclase
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_987_21
CSP1_5_NC10, NC10, Bacteria

Not on your lists

16332..17294
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00036B4495
YVTN family beta-propeller repeat-containing protein
Tax=CSP1_5_NC10
14_0929_12_30cm_scaffold_987_22
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(17311..17826)
DNA (516bp) protein (172aa)
hypothetical protein id=14429046 bin=bin3_NC10 species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
14_0929_12_30cm_scaffold_987_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17860..18282)
DNA (423bp) protein (141aa)
Putative F420-dependent enzyme id=4327982 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nitroreductase
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_987_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18289..19143)
DNA (855bp) protein (285aa)
alpha/beta hydrolase family protein id=14627252 bin=bin7_NC10_sister species=Nocardiopsis alba genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase family protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_987_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19140..19691)
DNA (552bp) protein (184aa)
Uncharacterized protein id=4541122 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_987_26
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(19702..21264)
DNA (1563bp) protein (521aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding id=4367862 bin=GWC2_Methylomirabilis_70_16 species=Methylobacterium radiotolerans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
carbon-monoxide dehydrogenase large subunit, coxL-like protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 26 items

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