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14_0929_12_30cm_scaffold_989

Search features with annotation key words

Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_12_30cm_scaffold_989_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..950)
DNA (948bp) protein (316aa)
Putative uncharacterized protein id=4866645 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_989_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(932..1561)
DNA (630bp) protein (210aa)
pmtA; phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17)
Similar to phosphatidylethanolamine N-methyltransferase id=4866643 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_989_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1672..3024)
DNA (1353bp) protein (451aa)
magnesium transporter; K06213 magnesium transporter id=14626380 bin=bin7_NC10_sister species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Mg/Co/Ni transporter
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_30cm_scaffold_989_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3026..4036)
DNA (1011bp) protein (337aa)
Phosphoesterase, RecJ domain protein id=4139262 bin=GWF2_Methylomirabilis_70_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphoesterase domain-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
14_0929_12_30cm_scaffold_989_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4080..5276)
DNA (1197bp) protein (399aa)
Fumarate hydratase class II id=4866639 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aspartate ammonia-lyase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_989_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5540..6751)
DNA (1212bp) protein (404aa)
apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) (BPG-independent PGAM) (aPGAM) (EC:5.4.2.1)
Putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) (BPG-independent PGAM) (APGAM) id=3020272 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_989_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6765..7667)
DNA (903bp) protein (301aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase id=3020269 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_989_8
Entamoeba histolytica, Entamoeba, Eukaryota

Not on your lists

7796..8404
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Entamoeba histolytica RepID=S0AZC5_ENTHI
Uncharacterized protein {ECO:0000313|EMBL:BAN39601.1}; TaxID=5759 species="Eukaryota; Amoebozoa; Archamoebae; Entamoebidae; Entamoeba.;" source="Entamoeba histolytica.;"
zipA; cell division protein ZipA-like protein
14_0929_12_30cm_scaffold_989_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8499..8717
DNA (219bp) protein (73aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_989_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8719..9099)
DNA (381bp) protein (127aa)
id=3020265 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_989_11
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

9227..10558
DNA (1332bp) protein (444aa)
Putative ABC-type sugar transport system,periplasmic-binding component n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJ66_9CHLR
Putative ABC-type sugar transport system,periplasmic-binding component {ECO:0000313|EMBL:CCF84728.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
extracellular solute-binding protein
14_0929_12_30cm_scaffold_989_12
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10563..11546
DNA (984bp) protein (328aa)
ABC transport system permease protein y4oQ n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0ETE9_CUPNN
ABC transporter permease
ABC transport system permease protein y4oQ {ECO:0000313|EMBL:AEI75620.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
14_0929_12_30cm_scaffold_989_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11546..12418
DNA (873bp) protein (291aa)
ABC transport system permease protein YcjP id=4964308 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Binding-protein-dependent transport systems inner membrane component
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_989_14
unknown

Not on your lists

12459..12908
DNA (450bp) protein (150aa)

This feature has no annotations

14_0929_12_30cm_scaffold_989_15
unknown

Not on your lists

12925..13926
DNA (1002bp) protein (334aa)

This feature has no annotations

14_0929_12_30cm_scaffold_989_16
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

14026..15357
DNA (1332bp) protein (444aa)
Putative ABC-type sugar transport system,periplasmic-binding component n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJ66_9CHLR
Putative ABC-type sugar transport system,periplasmic-binding component {ECO:0000313|EMBL:CCF84728.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
extracellular solute-binding protein
14_0929_12_30cm_scaffold_989_17
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15362..16225)
DNA (864bp) protein (288aa)
sugar ABC transporter permease n=1 Tax=Actinoplanes globisporus RepID=UPI0003678DFA
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR64225.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
ABC transporter permease
14_0929_12_30cm_scaffold_989_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(16222..17163)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000374E5A1
binding-protein-dependent transporter inner membrane component
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_12_30cm_scaffold_989_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17285..18376)
DNA (1092bp) protein (364aa)
Putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter id=2930701 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
glycerol-3-phosphate ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_989_20
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(18396..19247)
DNA (852bp) protein (284aa)
Putative uncharacterized protein id=3020066 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
sugar ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_12_30cm_scaffold_989_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19251..20219)
DNA (969bp) protein (323aa)
Putative uncharacterized protein id=3842142 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
14_0929_12_30cm_scaffold_989_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(20223..21245)
DNA (1023bp) protein (341aa)
Putative sugar uptake ABC transporter periplasmic solute-binding protein id=2228895 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_989_23
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(21242..22645)
DNA (1404bp) protein (468aa)
Putative sugar uptake ABC transporter periplasmic solute-binding protein id=2228895 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
14_0929_12_30cm_scaffold_989_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(22938..24149)
DNA (1212bp) protein (404aa)
Uncharacterized protein id=3020051 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily transporter
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_989_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

24221..25264
DNA (1044bp) protein (348aa)
Putative integral membrane protein id=2228897 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
integral membrane protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_989_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(25295..26512)
DNA (1218bp) protein (406aa)
Major facilitator superfamily MFS_1 id=2228940 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_989_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26509..27249)
DNA (741bp) protein (247aa)
3-deoxy-manno-octulosonate cytidylyltransferase id=2228942 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
3-deoxy-D-manno-octulosonate cytidylyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_30cm_scaffold_989_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(27260..28255)
DNA (996bp) protein (332aa)
coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase id=14627263 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
luciferase-like protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_989_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(28252..29025)
DNA (774bp) protein (258aa)
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.20)
2-dehydro-3-deoxyglucarate aldolase id=2228946 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_989_30
Gordonia effusa, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29114..30019
DNA (906bp) protein (302aa)
Putative oxidoreductase n=1 Tax=Gordonia effusa NBRC 100432 RepID=H0QYT8_9ACTO
Putative oxidoreductase {ECO:0000313|EMBL:GAB17989.1}; TaxID=1077974 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia effusa NBRC 100432.;"
luciferase-like protein
Displaying items 1-30 of 32 in total

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