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14_0929_12_30cm_scaffold_619

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_12_30cm_scaffold_619_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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3..170
DNA (168bp) protein (56aa)
50S ribosomal protein L18e n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TDW8_THEC1
50S ribosomal protein L18
Tax=RBG_16_Euryarchaeota_67_27_curated
14_0929_12_30cm_scaffold_619_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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167..613
DNA (447bp) protein (149aa)
50S ribosomal protein L13 n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RFX9_ARCPA
50S ribosomal protein L13
Tax=RBG_16_Euryarchaeota_67_27_curated
14_0929_12_30cm_scaffold_619_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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610..1008
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8H6_9EURY
rps9p; 30S ribosomal protein S9P
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_12_30cm_scaffold_619_4
unknown

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comp(818..1546)
DNA (729bp) protein (243aa)

This feature has no annotations

14_0929_12_30cm_scaffold_619_5
unknown

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1780..2130
DNA (351bp) protein (117aa)

This feature has no annotations

14_0929_12_30cm_scaffold_619_6
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2277..3353)
DNA (1077bp) protein (359aa)
NAD-dependent epimerase/dehydratase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase id=4678898 bin=GWC2_Syntrophobacterales_56_13 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_58_17_curated
14_0929_12_30cm_scaffold_619_7

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comp(3509..4012)
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D4G5_METSW
Uncharacterized protein {ECO:0000313|EMBL:KKK74033.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
14_0929_12_30cm_scaffold_619_8
Dacryopinax sp. DJM-731 SS1, Dacryopinax, Dacrymycetales, Dacrymycetes, Basidiomycota, Fungi

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comp(4257..5147)
DNA (891bp) protein (297aa)
S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Dacryopinax sp. (strain DJM 731) RepID=M5GBT7_DACSP
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000313|EMBL:EJU05905.1}; TaxID=745407 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Dacrymycetes; Dacrymycetales; Dacrymycetaceae; Dacryopinax.;" source="Dacryopinax sp. (strain DJM 731) (Brown rot fungus).;"
demethylmenaquinone methyltransferase
14_0929_12_30cm_scaffold_619_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(5446..6915)
DNA (1470bp) protein (490aa)
Benzoate-CoA ligase family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQ19_9CHLR
benzoate-CoA ligase family
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_30cm_scaffold_619_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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7010..8146
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00037E2E45
ATPase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
14_0929_12_30cm_scaffold_619_11
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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8143..9339
DNA (1197bp) protein (399aa)
VWA containing CoxE family protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UV92_ROSS1
VWA containing CoxE family protein
VWA containing CoxE family protein {ECO:0000313|EMBL:ABQ90545.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
14_0929_12_30cm_scaffold_619_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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9375..10250
DNA (876bp) protein (292aa)
Molybdopterin dehydrogenase FAD-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQ75_9CHLR
nicotine dehydrogenase chain A
Molybdopterin dehydrogenase FAD-binding {ECO:0000313|EMBL:EFH85723.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
14_0929_12_30cm_scaffold_619_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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10252..10788
DNA (537bp) protein (179aa)
(2Fe-2S)-binding domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8P8_SPHTD
(2Fe-2S)-binding domain-containing protein
Tax=RBG_16_Chloroflexi_63_12_curated
14_0929_12_30cm_scaffold_619_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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10785..13118
DNA (2334bp) protein (778aa)
Carbon-monoxide dehydrogenase, large subunit n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGS3_RHOM4
carbon-monoxide dehydrogenase, large subunit
Carbon-monoxide dehydrogenase, large subunit {ECO:0000313|EMBL:ACY49636.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
14_0929_12_30cm_scaffold_619_15

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13137..13577
DNA (441bp) protein (147aa)
Carbon monoxide dehydrogenase subunit G n=1 Tax=mine drainage metagenome RepID=T1AUN3_9ZZZZ
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:EQD45760.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
carbon monoxide dehydrogenase subunit G
14_0929_12_30cm_scaffold_619_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(13632..14750)
DNA (1119bp) protein (373aa)
glycoside hydrolase n=1 Tax=Xanthobacteraceae RepID=UPI0003787509
glycoside hydrolase family protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_12_30cm_scaffold_619_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(14752..15060)
DNA (309bp) protein (103aa)
sulfur transfer protein ThiS id=15192384 bin=GWC2_NOV_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
ThiS domain-containing protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0929_12_30cm_scaffold_619_18
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(15227..16849)
DNA (1623bp) protein (541aa)
hypothetical protein; K07402 xanthine dehydrogenase accessory factor id=14629464 bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
14_0929_12_30cm_scaffold_619_19
Aeropyrum pernix, Aeropyrum, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(16968..19307)
DNA (2340bp) protein (780aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N13 RepID=UPI00037C73A3 rbh
aldehyde dehydrogenase, large subunit rbh
Aldehyde dehydrogenase, large subunit {ECO:0000313|EMBL:BAA81228.2}; TaxID=272557 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Aeropyrum.;" source="Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC; 100138 / K1).;"
14_0929_12_30cm_scaffold_619_20

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comp(19312..19848)
DNA (537bp) protein (179aa)
Carbon-monoxide dehydrogenase small subunit n=1 Tax=uncultured prokaryote RepID=H5SI30_9ZZZZ
Carbon-monoxide dehydrogenase small subunit {ECO:0000313|EMBL:BAL55816.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
[2Fe-2S] binding domain-containing protein
14_0929_12_30cm_scaffold_619_21
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19854..20723)
DNA (870bp) protein (290aa)
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QF69_9FIRM
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein {ECO:0000313|EMBL:EKP95601.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
carbon monoxide dehydrogenase, medium subunit
14_0929_12_30cm_scaffold_619_22

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comp(20813..21661)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI00035C20AA
Uncharacterized protein {ECO:0000313|EMBL:AKA49397.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
XshC-Cox1-family protein
14_0929_12_30cm_scaffold_619_23
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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22034..22519
DNA (486bp) protein (162aa)
DNA starvation/stationary phase protection protein Dps n=1 Tax=Asaia sp. SF2.1 RepID=V8A5P9_9PROT
Recombinase RmuC {ECO:0000313|EMBL:KIF15246.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
Ferritin Dps family protein
14_0929_12_30cm_scaffold_619_24

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comp(22596..23360)
DNA (765bp) protein (255aa)
Pirin-like protein n=1 Tax=mine drainage metagenome RepID=T0ZEM2_9ZZZZ
Pirin-like protein {ECO:0000313|EMBL:EQD43533.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Pirin domain-containing protein
14_0929_12_30cm_scaffold_619_25
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

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23594..24427
DNA (834bp) protein (278aa)
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein id=3472290 bin=GWA2_Elusimicrobia_56_46 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
Tax=GWF2_Elusimicrobia_62_30_curated
14_0929_12_30cm_scaffold_619_26
unknown

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comp(24472..25749)
DNA (1278bp) protein (426aa)

This feature has no annotations

14_0929_12_30cm_scaffold_619_27
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(25937..28015)
DNA (2079bp) protein (693aa)
hypothetical protein n=1 Tax=Deinococcus sp. 2009 RepID=UPI0003B5E2B0
fibronectin I domain-containing protein
Tax=RBG_16_Euryarchaeota_67_27_curated
Displaying 27 items

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