ggKbase home page

14_0929_12_40cm_scaffold_8436

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_12_40cm_scaffold_8436_1
unknown

Not on your lists

comp(1..147)
DNA (147bp) protein (49aa)

This feature has no annotations

14_0929_12_40cm_scaffold_8436_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(119..3145)
DNA (3027bp) protein (1009aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG4_GEMAT
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
14_0929_12_40cm_scaffold_8436_3

Not on your lists

comp(3310..4092)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH0_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AIA11718.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
protein of unknown function DUF4098
14_0929_12_40cm_scaffold_8436_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4089..4976)
DNA (888bp) protein (296aa)
hypothetical protein
hypothetical protein id=24461211 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0929_12_40cm_scaffold_8436_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4995..5654)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00035F09CC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0929_12_40cm_scaffold_8436_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5709..5891)
DNA (183bp) protein (61aa)
RNA polymerase sigma factor id=3954865 bin=GWA2_Ignavibacteria_55_11 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
RNA polymerase ECF-type sigma factor
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0929_12_40cm_scaffold_8436_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5857..6192)
DNA (336bp) protein (112aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0929_12_40cm_scaffold_8436_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(6303..6677)
DNA (375bp) protein (125aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0929_12_40cm_scaffold_8436_9

Not on your lists

6716..7093
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM04429.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
14_0929_12_40cm_scaffold_8436_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7078..8208)
DNA (1131bp) protein (377aa)
Glycosyl transferase, family 2 n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YR04_9CHLB
glycosyl transferase family 2
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0929_12_40cm_scaffold_8436_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8205..9437)
DNA (1233bp) protein (411aa)
Sodium:dicarboxylate symporter n=2 Tax=Salinibacter ruber RepID=D5HA34_SALRM
sodium:dicarboxylate symporter
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0929_12_40cm_scaffold_8436_12
unknown

Not on your lists

9643..9936
DNA (294bp) protein (98aa)

This feature has no annotations

14_0929_12_40cm_scaffold_8436_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9933..10514
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG0_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0929_12_40cm_scaffold_8436_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10656..11375
DNA (720bp) protein (240aa)
DtxR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF6_GEMAT
DtxR family transcriptional regulator
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0929_12_40cm_scaffold_8436_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11356..12702
DNA (1347bp) protein (449aa)
Divalent metal cation transporter MntH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF8_GEMAT
Manganese transport protein mntH
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0929_12_40cm_scaffold_8436_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12702..12986
DNA (285bp) protein (95aa)
Universal stress protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF7_GEMAT
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AHG91899.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 16 items

View Taxonomy