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14_0929_12_40cm_scaffold_1559

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_12_40cm_scaffold_1559_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(240..806)
DNA (567bp) protein (189aa)
signAl transduction histidine kinase containing a receiver domain id=14627170 bin=bin7_NC10_sister species=Thermus scotoductus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
14_0929_12_40cm_scaffold_1559_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(834..1400)
DNA (567bp) protein (189aa)
Acyl dehydratase id=3479315 bin=GWC2_Methylomirabilis_70_16 species=Caulobacter sp. genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl dehydratase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_12_40cm_scaffold_1559_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(1397..1909)
DNA (513bp) protein (171aa)
Putative uncharacterized protein id=3479314 bin=GWC2_Methylomirabilis_70_16 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_12_40cm_scaffold_1559_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1918..3048)
DNA (1131bp) protein (377aa)
poly(R)-hydroxyalkanoic acid synthase subunit PhaC id=14626101 bin=bin7_NC10_sister species=Aneurinibacillus aneurinilyticus genus=Aneurinibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
poly(R)-hydroxyalkanoic acid synthase subunit PhaC rbh
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_1559_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3128..4216)
DNA (1089bp) protein (363aa)
hypothetical protein id=14627173 bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
14_0929_12_40cm_scaffold_1559_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4213..4533)
DNA (321bp) protein (107aa)
Putative sterol carrier protein id=4320175 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_1559_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4732..5250)
DNA (519bp) protein (173aa)
Probable oxidoreductase (Short-chain dehydrogenase family) id=3526405 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_1559_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5332..6105)
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase/isomerase id=1890904 bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase/isomerase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_12_40cm_scaffold_1559_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6095..6682)
DNA (588bp) protein (196aa)
Transcriptional regulator, TetR family id=3526407 bin=GWC2_Methylomirabilis_70_16 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TetR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_1559_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6733..7668
DNA (936bp) protein (312aa)
putative F420-dependent oxidoreductase id=14626112 bin=bin7_NC10_sister species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
putative oxidoreductase
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_40cm_scaffold_1559_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7694..8653)
DNA (960bp) protein (320aa)
threonine dehydratase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19] id=14626116 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
pyridoxal-5'-phosphate-dependent enzyme subunit beta
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_40cm_scaffold_1559_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8677..9495
DNA (819bp) protein (273aa)
putative signal peptide peptidase SppA (EC:3.4.21.-)
Putative Signal peptide peptidase SppA id=3526411 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_1559_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9561..10940
DNA (1380bp) protein (460aa)
Sugar ABC superfamily ATP binding cassette transporter, substrate-binding id=1703830 bin=GWA2_Methylomirabilis_73_35 species=Mobiluncus mulieris genus=Mobiluncus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular solute-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_0929_12_40cm_scaffold_1559_14

Not on your lists

10963..11838
DNA (876bp) protein (292aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL70358.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Binding-protein-dependent transport systems inner membrane component id=1703832 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type sugar transport systems, permease component
14_0929_12_40cm_scaffold_1559_15
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11835..12668
DNA (834bp) protein (278aa)
ABC-type sugar transport system, permease component id=1703834 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia sp. Ch1-1 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type sugar transport systems, permease component
Tax=RBG_16_Deltaproteobacteria_49_23_curated
14_0929_12_40cm_scaffold_1559_16
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12665..12850)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E9F3_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHN09686.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
14_0929_12_40cm_scaffold_1559_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12861..13436)
DNA (576bp) protein (192aa)
Coenzyme A pyrophosphatase id=1890929 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA mismatch repair protein MutT
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_40cm_scaffold_1559_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13436..14221)
DNA (786bp) protein (262aa)
Putative oxidoreductase id=1890936 bin=GWA2_Methylomirabilis_73_35 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_40cm_scaffold_1559_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14218..14982)
DNA (765bp) protein (255aa)
2-oxopent-4-enoate hydratase (EC:4.2.1.80)
4-oxalocrotonate decarboxylase id=1890939 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_40cm_scaffold_1559_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14979..15755)
DNA (777bp) protein (259aa)
sat:SYN_01020 Sir2 family NAD-dependent deacetylase; K12410 NAD-dependent deacetylase [EC:3.5.1.-] id=1241516 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
sir2 family protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_40cm_scaffold_1559_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15752..16150)
DNA (399bp) protein (133aa)
id=4117858 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_0929_12_40cm_scaffold_1559_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16244..17047)
DNA (804bp) protein (268aa)
Abortive infection protein id=1890947 bin=GWA2_Methylomirabilis_73_35 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
abortive infection protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_1559_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17166..17615
DNA (450bp) protein (150aa)
intradiol ring-cleavage dioxygenase id=14625204 bin=bin7_NC10_sister species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
intradiol ring-cleavage dioxygenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_1559_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17616..18761)
DNA (1146bp) protein (382aa)
Putative uncharacterized protein id=3716770 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_40cm_scaffold_1559_25
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(18897..19355)
DNA (459bp) protein (153aa)
Putative uncharacterized protein id=3960122 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_12_40cm_scaffold_1559_26
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19514..19930)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XKL2_DESMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH76952.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
14_0929_12_40cm_scaffold_1559_27
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20005..20205)
DNA (201bp) protein (67aa)
Putative Serine protease do-like {ECO:0000313|EMBL:CCF19827.1}; EC=3.4.21.- {ECO:0000313|EMBL:CCF19827.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
Putative Serine protease do-like n=1 Tax=Rhizobium sp. RepID=L0NHQ2_RHISP
14_0929_12_40cm_scaffold_1559_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

20263..22260
DNA (1998bp) protein (666aa)
DNA ligase D id=4930074 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ligD; ATP-dependent DNA ligase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0929_12_40cm_scaffold_1559_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22474..24306
DNA (1833bp) protein (611aa)
4-alpha-glucanotransferase (EC:2.4.1.25) rbh
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003649C3C rbh
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_1559_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(24322..25185)
DNA (864bp) protein (288aa)
DMT family permease id=4622876 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
DMT family permease
Tax=GWA2_Rokubacteria_70_23_curated
Displaying items 1-30 of 31 in total

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