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14_0929_12_40cm_scaffold_260

Search features with annotation key words

Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_12_40cm_scaffold_260_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..486)
DNA (486bp) protein (162aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] id=14627959 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_260_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(474..1241)
DNA (768bp) protein (256aa)
Uncharacterized protein id=14627958 bin=bin7_NC10_sister species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_260_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

1318..2304
DNA (987bp) protein (329aa)
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=14627933 bin=bin7_NC10_sister species=Mycobacterium sp. 155 genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
pyrD; dihydroorotate oxidase (EC:1.3.3.1)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
14_0929_12_40cm_scaffold_260_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2620..2859
DNA (240bp) protein (80aa)
id=14627932 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_40cm_scaffold_260_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2864..3316)
DNA (453bp) protein (151aa)
putative glyoxalase; K07104 id=14627931 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
putative glyoxalase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_0929_12_40cm_scaffold_260_6
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(3321..4013)
DNA (693bp) protein (231aa)
DNA repair protein RadC id=4773671 bin=GWC2_Methylomirabilis_70_16 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DNA repair protein RadC
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
14_0929_12_40cm_scaffold_260_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4056..4247)
DNA (192bp) protein (64aa)
Putative uncharacterized protein id=4880679 bin=GWC2_Chloroflexi_73_18 species=Thermus aquaticus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_260_8
GWA2_RIF01_43_8_curated, RIF1, Bacteria

Not on your lists

comp(4478..4771)
DNA (294bp) protein (98aa)
Uncharacterized protein id=4189584 bin=GWF2_Methylomirabilis_70_14 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_RIF01_43_8_curated
14_0929_12_40cm_scaffold_260_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4842..5282)
DNA (441bp) protein (147aa)
Uncharacterized protein family UPF0079, ATPase id=4773673 bin=GWC2_Methylomirabilis_70_16 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_260_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5272..6831)
DNA (1560bp) protein (520aa)
Putative uncharacterized protein yjeF id=3047191 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
yjeF; carbohydrate kinase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_260_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6831..7598)
DNA (768bp) protein (256aa)
id=3047192 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_40cm_scaffold_260_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7567..7977)
DNA (411bp) protein (137aa)
Holo-[acyl-carrier-protein] synthase id=4773676 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acpS; 4'-phosphopantetheinyl transferase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_40cm_scaffold_260_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7974..9326)
DNA (1353bp) protein (451aa)
Phosphoglucosamine mutase id=4870787 bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glmM; phosphoglucosamine mutase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_260_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9323..9967)
DNA (645bp) protein (215aa)
YbbR family protein id=4773678 bin=GWC2_Methylomirabilis_70_16 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_12_40cm_scaffold_260_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9967..10815)
DNA (849bp) protein (283aa)
Putative uncharacterized protein id=4773679 bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_12_40cm_scaffold_260_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10812..11597)
DNA (786bp) protein (262aa)
Dihydropteroate synthase id=4773680 bin=GWC2_Methylomirabilis_70_16 species=Thermogladius cellulolyticus genus=Thermogladius taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dihydropteroate synthase
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_12_40cm_scaffold_260_17
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11701..12411)
DNA (711bp) protein (237aa)
abortive infection protein n=1 Tax=Paenibacillus elgii RepID=UPI000248D6EF
Uncharacterized protein {ECO:0000313|EMBL:KEQ21798.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
abortive infection protein
14_0929_12_40cm_scaffold_260_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12469..14286)
DNA (1818bp) protein (606aa)
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH id=2610206 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_260_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14339..14875)
DNA (537bp) protein (179aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Putative bifunctional protein tilS/hprT id=2285131 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_12_40cm_scaffold_260_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14877..15497)
DNA (621bp) protein (207aa)
Sporulation and cell division repeat protein id=2285129 bin=GWA2_Methylomirabilis_73_35 species=Xanthomonas fragariae genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_260_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


comp(15498..17159)
DNA (1662bp) protein (554aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19) rbh
Arginine--tRNA ligase id=2610199 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_12_40cm_scaffold_260_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17198..18151)
DNA (954bp) protein (318aa)
Cobalamin biosynthesis protein CobD id=4820075 bin=GWC2_Methylomirabilis_70_16 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cbiB; cobalamin biosynthesis protein CbiB
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_12_40cm_scaffold_260_23
unknown

Not on your lists

18241..18570
DNA (330bp) protein (110aa)

This feature has no annotations

14_0929_12_40cm_scaffold_260_24
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

18647..19879
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035ED350
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABJ85846.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0929_12_40cm_scaffold_260_25
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

19876..21006
DNA (1131bp) protein (377aa)
Efflux transporter, RND family, MFP subunit id=1778312 bin=GWB2_Proteobacteria_55_19 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
putative acriflavine resistance protein A
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
14_0929_12_40cm_scaffold_260_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

21003..24086
DNA (3084bp) protein (1028aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QR08_9CYAN
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:CDM64147.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cusA; heavy metal efflux pump, CzcA family
14_0929_12_40cm_scaffold_260_27
unknown

Not on your lists

24083..24373
DNA (291bp) protein (97aa)

This feature has no annotations

14_0929_12_40cm_scaffold_260_28
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

24475..27552
DNA (3078bp) protein (1026aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QR08_9CYAN rbh
cusA; heavy metal efflux pump, CzcA family rbh
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:AGY60089.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
14_0929_12_40cm_scaffold_260_29
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

27549..28649
DNA (1101bp) protein (367aa)
Glycosyl transferase, group 1 id=4334274 bin=GWF2_Methylomirabilis_70_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_0929_12_40cm_scaffold_260_30
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(28666..29640)
DNA (975bp) protein (325aa)
hypothetical protein
id=3308571 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
Displaying items 1-30 of 44 in total

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