ggKbase home page

14_1009_02_40cm_scaffold_2159

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_02_40cm_scaffold_2159_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..206)
DNA (204bp) protein (68aa)
Transcriptional regulator, TrmB n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5S4_9EURY
transcriptional regulator, TrmB
Tax=RBG_16_Euryarchaeota_68_12_curated
14_1009_02_40cm_scaffold_2159_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

531..755
DNA (225bp) protein (75aa)
50S ribosomal protein L44e n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HQG8_ACIS0
ribosomal protein L44E
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_02_40cm_scaffold_2159_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

752..931
DNA (180bp) protein (60aa)
30S ribosomal protein S27e n=3 Tax=Thermococcus RepID=RS27_THEON
rps27e; 30S ribosomal protein S27e
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_2159_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

932..1735
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003618409 rbh
translation initiation factor 2, alpha subunit (eIF-2alpha) rbh
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_2159_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1740..1910
DNA (171bp) protein (57aa)
Ribosome biogenesis protein Nop10 n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGK8_ARCPA
RNA-binding protein Nop10p
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_2159_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

1917..2678
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003780283
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_02_40cm_scaffold_2159_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

2807..3508
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000369A72A
putative signal transduction protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_2159_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3513..4139)
DNA (627bp) protein (209aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_2159_9
unknown

Not on your lists

comp(4221..4430)
DNA (210bp) protein (70aa)

This feature has no annotations

14_1009_02_40cm_scaffold_2159_trna_1
unknown

Not on your lists

4244..4318
DNA (75bp)
transferRNA Glu
14_1009_02_40cm_scaffold_2159_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

4487..5278
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1BKD6_9ZZZZ
Tax=RBG_16_Euryarchaeota_68_12_curated
14_1009_02_40cm_scaffold_2159_11
unknown

Not on your lists

5436..5561
DNA (126bp) protein (42aa)

This feature has no annotations

14_1009_02_40cm_scaffold_2159_12
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5672..6172
DNA (501bp) protein (167aa)
Peroxiredoxin n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1D4_DESTA
Peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AFM23375.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
14_1009_02_40cm_scaffold_2159_13
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

6184..6735
DNA (552bp) protein (184aa)
DSBA oxidoreductase n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002FB0CEE
Protein-disulfide isomerase {ECO:0000313|EMBL:AIF83220.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
DSBA oxidoreductase
14_1009_02_40cm_scaffold_2159_14
unknown

Not on your lists

6885..8357
DNA (1473bp) protein (491aa)

This feature has no annotations

14_1009_02_40cm_scaffold_2159_15
unknown

Not on your lists

comp(8327..9187)
DNA (861bp) protein (287aa)

This feature has no annotations

14_1009_02_40cm_scaffold_2159_16
Ignisphaera aggregans, Ignisphaera, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(9199..10227)
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) RepID=E0STM6_IGNAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADM27642.1}; TaxID=583356 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Ignisphaera.;" source="Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1).;"
14_1009_02_40cm_scaffold_2159_17
unknown

Not on your lists

comp(10290..11210)
DNA (921bp) protein (307aa)

This feature has no annotations

14_1009_02_40cm_scaffold_2159_18
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11435..12739)
DNA (1305bp) protein (435aa)
Isocitrate lyase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WWP0_KYRT2
isocitrate lyase
Isocitrate lyase {ECO:0000313|EMBL:ADG05741.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
14_1009_02_40cm_scaffold_2159_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(12925..13806)
DNA (882bp) protein (294aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_02_40cm_scaffold_2159_20
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13775..15256)
DNA (1482bp) protein (494aa)
Tax=GWC2_Geobacteraceae_58_44_curated
Displaying 21 items

View Taxonomy