ggKbase home page

14_1009_02_40cm_scaffold_4313

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_02_40cm_scaffold_4313_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

2..583
DNA (582bp) protein (194aa)
Putative methylthioribose-1-phosphate isomerase n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0LVK1_9EURY
S-methyl-5-thioribose-1-phosphate isomerase
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_02_40cm_scaffold_4313_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


623..1693
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C0B2E
C/D box methylation guide ribonucleoprotein complex aNOP56 subunit
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_4313_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


1739..2125
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036320C7
translation initiation factor eIF-5A
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_02_40cm_scaffold_4313_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

2168..3025
DNA (858bp) protein (286aa)
Agmatinase n=1 Tax=mine drainage metagenome RepID=T0YEH6_9ZZZZ
agmatinase
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_02_40cm_scaffold_4313_5
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3284..3922)
DNA (639bp) protein (213aa)
Tax=GWB2_Desulfobacterales_56_26_curated
14_1009_02_40cm_scaffold_4313_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

3924..4673
DNA (750bp) protein (250aa)
Protein belonging to Uncharacterized protein family UPF0027 n=2 Tax=mine drainage metagenome RepID=T1A867_9ZZZZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_02_40cm_scaffold_4313_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

4670..5191
DNA (522bp) protein (174aa)
Archaemetzincin n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=AMZA_METKA
Zn-dependent protease
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_4313_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(5166..5897)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000361254F
methylase involved in ubiquinone/menaquinone biosynthesis
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_02_40cm_scaffold_4313_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

5944..6252
DNA (309bp) protein (103aa)
hypothetical protein id=15193229 bin=GWC2_NOV_55_46 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_02_40cm_scaffold_4313_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(6242..7435)
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9U0_9ARCH rbh
MFS transporter family protein
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_02_40cm_scaffold_4313_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(7440..8513)
DNA (1074bp) protein (358aa)
Calcium/proton exchanger (Cax) n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7S0_METCZ
calcium/proton exchanger (cax)
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_02_40cm_scaffold_4313_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

8587..10023
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000368EB44
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_02_40cm_scaffold_4313_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

10083..10853
DNA (771bp) protein (257aa)
Putative ICC-like phosphoesterase n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YJX1_9EURY
putative ICC-like phosphoesterase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_4313_14
unknown

Not on your lists

10862..11203
DNA (342bp) protein (114aa)

This feature has no annotations

14_1009_02_40cm_scaffold_4313_trna_1
unknown

Not on your lists

comp(11226..11298)
DNA (73bp)
transferRNA Val
14_1009_02_40cm_scaffold_4313_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(11342..11698)
DNA (357bp) protein (119aa)
Roadblock/LC7 family protein n=1 Tax=mine drainage metagenome RepID=T0ZAA4_9ZZZZ
Roadblock/LC7 family protein
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_02_40cm_scaffold_4313_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(11695..12102)
DNA (408bp) protein (136aa)
V4R domain protein n=1 Tax=mine drainage metagenome RepID=T0ZKA8_9ZZZZ
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_02_40cm_scaffold_4313_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(12178..12711)
DNA (534bp) protein (178aa)
CBS domain pair protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IH78_ACIB4
signal transduction protein with CBS domains
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_02_40cm_scaffold_4313_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

12752..13441
DNA (690bp) protein (230aa)
Protein ABOONEI_605 n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBA8_ACIB4
AMMECR1 domain protein
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_02_40cm_scaffold_4313_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

13428..14285
DNA (858bp) protein (286aa)
dihydroorotase (EC:3.5.2.3)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003674D8D
Tax=RBG_16_Euryarchaeota_67_27_curated
Displaying 20 items

View Taxonomy